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Entry version 97 (31 Jul 2019)
Sequence version 1 (19 Jul 2004)
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Protein
Submitted name:

Uncharacterized protein

Gene

CAGL0M09108g

Organism
Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (Yeast) (Torulopsis glabrata)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:CAGL0M09108gImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCandida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (Yeast) (Torulopsis glabrata)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri284593 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeNakaseomycesNakaseomyces/Candida clade
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002428 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome M

Organism-specific databases

Candida Genome Database

More...
CGDi
CAL0137057 CAGL0M09108g

Eukaryotic Pathogen Database Resources

More...
EuPathDBi
FungiDB:CAGL0M09108g

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
5478.XP_449741.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini339 – 425RRMInterPro annotationAdd BLAST87
Domaini534 – 891PUM-HDInterPro annotationAdd BLAST358
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati597 – 632PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati633 – 668PumilioPROSITE-ProRule annotationAdd BLAST36
Repeati670 – 708PumilioPROSITE-ProRule annotationAdd BLAST39
Repeati781 – 817PumilioPROSITE-ProRule annotationAdd BLAST37

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni62 – 87DisorderedSequence analysisAdd BLAST26
Regioni245 – 283DisorderedSequence analysisAdd BLAST39
Regioni477 – 518DisorderedSequence analysisAdd BLAST42
Regioni891 – 949DisorderedSequence analysisAdd BLAST59
Regioni1052 – 1109DisorderedSequence analysisAdd BLAST58

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili207 – 227Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi477 – 505PolarSequence analysisAdd BLAST29

Keywords - Domaini

Coiled coilSequence analysis, RepeatSAAS annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG4574 Eukaryota
COG5099 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000113136

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6FJ53

KEGG Orthology (KO)

More...
KOi
K17974

Identification of Orthologs from Complete Genome Data

More...
OMAi
CLEAHDI

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.10.10, 1 hit
3.30.70.330, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR033133 PUM-HD
IPR001313 Pumilio_RNA-bd_rpt
IPR035979 RBD_domain_sf
IPR000504 RRM_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00806 PUF, 3 hits
PF00076 RRM_1, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00025 Pumilio, 6 hits
SM00360 RRM, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 1 hit
SSF54928 SSF54928, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50302 PUM, 4 hits
PS50303 PUM_HD, 1 hit
PS50102 RRM, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q6FJ53-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEKKFTNIPE VIDPGITIPI FEEDVDAMSL EQPQKLGSYR ARAGKFSNTL
60 70 80 90 100
SNLLPSISAK LHHSKKQGKG AGADPNASTP DSSESAIGNL SAKSSQMFMM
110 120 130 140 150
NTDQGMPSMT AAVAADMGPP RPAHVEGFSA RGAAQDNTTP PRDADKLVHF
160 170 180 190 200
PESTEYLISR PRTSNDSFGN NLPRQISRTR NNTMSSQITS ISSIVPKPLP
210 220 230 240 250
NTVWNNNDTV NQQYQQQQQQ QQQQQQQMVP QINTYNAMDM GQQPNYGDTM
260 270 280 290 300
NQQMGGNNLT VNNAWNSNRP RSHSNASSIY TDAPQYDTVG RSRAASSYAH
310 320 330 340 350
GNSNIPLVAD EVDPRSLNWV TTDLLVPPIN QISNLLPTNT ISISNVFPLQ
360 370 380 390 400
QQQPHLNNAI NLTSASLATL CSKYGEVISA RTLRGINMAL VEFDSVDSAI
410 420 430 440 450
RALDALQGKE VSMIGAPSKV SFAKILPMHY QQSNHTQQQN AQTTQAESVS
460 470 480 490 500
QPLLQEQLNN GAVTFHQQGN ISIPVFNQNQ YSNGQNTNNN ASSHPGTSSS
510 520 530 540 550
SDKEQCPFPL PPPPLSGKKS ELEQVVLQFN SDHDESQVAS LINNSLKTKP
560 570 580 590 600
TSDVNNFGPL PGSVSNKQFD APKLRELRKA IDSNSLSDIE IEQLAIAMLD
610 620 630 640 650
ELPELSSDYL GNTIVQKLFE HSSDIIKDIM LRKTGKYLAS MGVHKNGTWA
660 670 680 690 700
CQKIITKATT PRQIKLVTDG IKDYCTALFN DQFGNYVIQC VLKFGYPWNS
710 720 730 740 750
FIFESILSNF WTIVQNRYGA RAVRACLEAH DIVTMEQTLV LSAMIVIYAE
760 770 780 790 800
YLTTNSNGTL LVTWFLDTCV LSNRHSILAP RLVNHIVDLC RHRLASLTIL
810 820 830 840 850
KILNYRGDDA ARKTILNTVF GNCETDEPQQ ILYQILCDVN YGPTFVYKVL
860 870 880 890 900
SMPLLEDDIR IHIIAQVRKI LMESNTAQHH RRLMEEVGLM TTGNNNNQTS
910 920 930 940 950
NNKHRKNSSH TYVQDNNGHM RGVSVSSVRS GGSRQTGLTP NIPQTFQMPS
960 970 980 990 1000
LPNTSMSTVV SGNMSLNQLP TQMQQQQQSG VLPQTVQQQQ QQPMVGSNQN
1010 1020 1030 1040 1050
NAMSYMNYPG VFPMGYPNNN SSYGINDDLV SKLDMLTLGN GTHLSLPQLS
1060 1070 1080 1090 1100
VTNHENNTNY SNNNNNNNNN NNNNNNSNGN NNTNGGNPMN LMNSSLNNTQ

EFGGSSLWN
Length:1,109
Mass (Da):122,419
Last modified:July 19, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i0AA847D40940A5CD
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CR380959 Genomic DNA Translation: CAG62717.1

NCBI Reference Sequences

More...
RefSeqi
XP_449741.1, XM_449741.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
CAG62717; CAG62717; CAGL0M09108g

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
2891303

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
cgr:CAGL0M09108g

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR380959 Genomic DNA Translation: CAG62717.1
RefSeqiXP_449741.1, XM_449741.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi5478.XP_449741.1

Genome annotation databases

EnsemblFungiiCAG62717; CAG62717; CAGL0M09108g
GeneIDi2891303
KEGGicgr:CAGL0M09108g

Organism-specific databases

CGDiCAL0137057 CAGL0M09108g
EuPathDBiFungiDB:CAGL0M09108g

Phylogenomic databases

eggNOGiKOG4574 Eukaryota
COG5099 LUCA
HOGENOMiHOG000113136
InParanoidiQ6FJ53
KOiK17974
OMAiCLEAHDI

Family and domain databases

Gene3Di1.25.10.10, 1 hit
3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR033133 PUM-HD
IPR001313 Pumilio_RNA-bd_rpt
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00806 PUF, 3 hits
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00025 Pumilio, 6 hits
SM00360 RRM, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50302 PUM, 4 hits
PS50303 PUM_HD, 1 hit
PS50102 RRM, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ6FJ53_CANGA
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6FJ53
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: July 31, 2019
This is version 97 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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