Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein MEMO1

Gene

memo1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May control cell migration by relaying extracellular chemotactic signals to the microtubule cytoskeleton. Mediator of ERBB2 signaling (By similarity).By similarity

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-XTR-6785631 ERBB2 Regulates Cell Motility

Names & Taxonomyi

Protein namesi
Recommended name:
Protein MEMO1
Alternative name(s):
Mediator of ErbB2-driven cell motility 1
Short name:
Memo-1
Gene namesi
Name:memo1
ORF Names:TGas016p14.1
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-5777366 memo1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002605131 – 297Protein MEMO1Add BLAST297

Proteomic databases

PaxDbiQ6DJ03

Expressioni

Gene expression databases

BgeeiENSXETG00000008547 Expressed in 15 organ(s), highest expression level in embryo
ExpressionAtlasiQ6DJ03 baseline

Interactioni

Subunit structurei

Interacts with ERBB2.By similarity

Protein-protein interaction databases

STRINGi8364.ENSXETP00000063262

Structurei

3D structure databases

ProteinModelPortaliQ6DJ03
SMRiQ6DJ03
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MEMO1 family.Curated

Phylogenomic databases

eggNOGiKOG3086 Eukaryota
COG1355 LUCA
GeneTreeiENSGT00390000006408
HOGENOMiHOG000225260
HOVERGENiHBG050811
InParanoidiQ6DJ03
KOiK06990

Family and domain databases

CDDicd07361 MEMO_like, 1 hit
HAMAPiMF_00055 MEMO1, 1 hit
InterProiView protein in InterPro
IPR002737 MEMO1_fam
PANTHERiPTHR11060 PTHR11060, 1 hit
PfamiView protein in Pfam
PF01875 Memo, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q6DJ03-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSNRALCREA SHAGSWYTAS GSQLSAQLDG WLSQAQTSKR PARAIIAPHA
60 70 80 90 100
GYTYCGSCAA HAYKQVDPSV TRRVFILGPS HHVALSRCAL STVDIYRTPL
110 120 130 140 150
YDLHIDQKVY GDLWKTGMFE RMSLQTDEDE HSIEMHLPYT AKTMESHKDD
160 170 180 190 200
LTIVPVLVGA LSESKEQEFG KLFSKYLADP TNLFVISSDF CHWGQRFRYT
210 220 230 240 250
YYDESQGEIY RSIENLDKMG MGIIEQLDPV QFSNYLKKYH NTICGRHPIG
260 270 280 290
VLLNAATELQ KNGVNMSFSF LNYAQSSQCR SWQDSSVSYA AGALVVH
Length:297
Mass (Da):33,448
Last modified:August 16, 2004 - v1
Checksum:i21234CD5E1CE0B07
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F7CV78F7CV78_XENTR
Protein MEMO1
memo1
298Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR762358 mRNA Translation: CAJ83509.1
BC075382 mRNA Translation: AAH75382.1
RefSeqiNP_001004925.1, NM_001004925.1
UniGeneiStr.10150

Genome annotation databases

EnsembliENSXETT00000018710; ENSXETP00000018710; ENSXETG00000008547
GeneIDi448307
KEGGixtr:448307

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR762358 mRNA Translation: CAJ83509.1
BC075382 mRNA Translation: AAH75382.1
RefSeqiNP_001004925.1, NM_001004925.1
UniGeneiStr.10150

3D structure databases

ProteinModelPortaliQ6DJ03
SMRiQ6DJ03
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000063262

Proteomic databases

PaxDbiQ6DJ03

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000018710; ENSXETP00000018710; ENSXETG00000008547
GeneIDi448307
KEGGixtr:448307

Organism-specific databases

CTDi7795
XenbaseiXB-GENE-5777366 memo1

Phylogenomic databases

eggNOGiKOG3086 Eukaryota
COG1355 LUCA
GeneTreeiENSGT00390000006408
HOGENOMiHOG000225260
HOVERGENiHBG050811
InParanoidiQ6DJ03
KOiK06990

Enzyme and pathway databases

ReactomeiR-XTR-6785631 ERBB2 Regulates Cell Motility

Gene expression databases

BgeeiENSXETG00000008547 Expressed in 15 organ(s), highest expression level in embryo
ExpressionAtlasiQ6DJ03 baseline

Family and domain databases

CDDicd07361 MEMO_like, 1 hit
HAMAPiMF_00055 MEMO1, 1 hit
InterProiView protein in InterPro
IPR002737 MEMO1_fam
PANTHERiPTHR11060 PTHR11060, 1 hit
PfamiView protein in Pfam
PF01875 Memo, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiMEMO1_XENTR
AccessioniPrimary (citable) accession number: Q6DJ03
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 16, 2004
Last modified: September 12, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again