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Protein

Protein Wnt

Gene

wnt5b

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Ligand for members of the frizzled family of seven transmembrane receptors.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinUniRule annotationSAAS annotation
Biological processWnt signaling pathwayUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein WntUniRule annotation
Gene namesi
Name:wnt5bImported
ORF Names:TGas012b13.1-001Imported, XENTR_v90030950mgImported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-480396 wnt5b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Extracellular matrixSAAS annotation, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_501529844725 – 360Protein WntSequence analysisAdd BLAST336

Keywords - PTMi

Disulfide bondSAAS annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Sequence similaritiesi

Belongs to the Wnt family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3913 Eukaryota
ENOG410XQZ1 LUCA
HOGENOMiHOG000039529
HOVERGENiHBG001595
KOiK00444
OrthoDBiEOG091G0OFF

Family and domain databases

InterProiView protein in InterPro
IPR005817 Wnt
IPR026537 Wnt5b
IPR018161 Wnt_CS
PANTHERiPTHR12027 PTHR12027, 1 hit
PTHR12027:SF87 PTHR12027:SF87, 1 hit
PfamiView protein in Pfam
PF00110 wnt, 1 hit
PRINTSiPR01349 WNTPROTEIN
SMARTiView protein in SMART
SM00097 WNT1, 1 hit
PROSITEiView protein in PROSITE
PS00246 WNT1, 1 hit

Sequencei

Sequence statusi: Complete.

Q6DII0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGILRLLLV TSLLSCWKQA LVGANSWWSL ALNPVQRPEM YIIGAQPLCS
60 70 80 90 100
QLTGLSPGQR KLCQLYQDHM VYIGEGAKTG IKECQHQFKH RRWNCSTVDN
110 120 130 140 150
NSVFGRVMQI GSREAAFTYA ISAAGVVNAI SRACREGELS TCGCSRTPRP
160 170 180 190 200
KDLPRDWLWG GCGDNVEYGY RFAKEFVDAR EREKNFPKGS EEQARSLMNL
210 220 230 240 250
QNNEAGRRAV YKLADVACKC HGVSGSCSLK TCWLQLADFR KVGEYIKEKY
260 270 280 290 300
DSAASMRLNK RNKLEQVNQR FNPPTAEDLV YLDPSPDYCL YNETTGSLGT
310 320 330 340 350
HGRQCNKTSE GMDGCELMCC GRGYDQFKTV QVERCHCKFH WCCFVKCKKC
360
TEIVDQYVCK
Length:360
Mass (Da):40,704
Last modified:August 16, 2004 - v1
Checksum:iA712F42FF085EAB2
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC075560 mRNA Translation: AAH75560.1
CR760740 mRNA Translation: CAJ83472.1
KV460418 Genomic DNA Translation: OCA18429.1
RefSeqiNP_001006767.1, NM_001006766.1
UniGeneiStr.24254

Genome annotation databases

GeneIDi448452
KEGGixtr:448452

Similar proteinsi

Entry informationi

Entry nameiQ6DII0_XENTR
AccessioniPrimary (citable) accession number: Q6DII0
Entry historyiIntegrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: July 18, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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