UniProtKB - Q6DIC6 (Q6DIC6_MOUSE)
Protein
Submitted name:
Tro protein
Gene
Tro
Organism
Mus musculus (Mouse)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Tro proteinImportedSubmitted name: TrophininImported |
Gene namesi | Name:TroImported |
Organismi | Mus musculus (Mouse)Imported |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:1928994, Tro |
Subcellular locationi
Expressioni
Gene expression databases
Bgeei | ENSMUSG00000025272, Expressed in amygdala and 233 other tissues |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 589 – 787 | MAGEInterPro annotationAdd BLAST | 199 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 82 | DisorderedSequence analysisAdd BLAST | 82 | |
Regioni | 100 – 143 | DisorderedSequence analysisAdd BLAST | 44 | |
Regioni | 208 – 510 | DisorderedSequence analysisAdd BLAST | 303 | |
Regioni | 545 – 577 | DisorderedSequence analysisAdd BLAST | 33 | |
Regioni | 997 – 1022 | DisorderedSequence analysisAdd BLAST | 26 | |
Regioni | 1927 – 2036 | DisorderedSequence analysisAdd BLAST | 110 | |
Regioni | 2055 – 2087 | DisorderedSequence analysisAdd BLAST | 33 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 208 – 228 | PolarSequence analysisAdd BLAST | 21 | |
Compositional biasi | 237 – 437 | PolarSequence analysisAdd BLAST | 201 | |
Compositional biasi | 455 – 483 | PolarSequence analysisAdd BLAST | 29 | |
Compositional biasi | 1927 – 1961 | PolarSequence analysisAdd BLAST | 35 |
Phylogenomic databases
eggNOGi | KOG4562, Eukaryota |
GeneTreei | ENSGT00940000162763 |
HOGENOMi | CLU_001549_0_0_1 |
OrthoDBi | 1195799at2759 |
TreeFami | TF352132 |
Family and domain databases
Gene3Di | 1.10.10.1200, 1 hit 1.10.10.1210, 1 hit |
InterProi | View protein in InterPro IPR037445, MAGE IPR041898, MAGE_WH1 IPR041899, MAGE_WH2 IPR002190, MHD_dom |
PANTHERi | PTHR11736, PTHR11736, 2 hits |
Pfami | View protein in Pfam PF01454, MAGE, 1 hit |
SMARTi | View protein in SMART SM01373, MAGE, 1 hit |
PROSITEi | View protein in PROSITE PS50838, MAGE, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All
Q6DIC6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDRRNDHGHR VPTFQGPLPP AGSLGLPFSP DVQSETTEKD PPIASRSKKN
60 70 80 90 100
KNKKNSIKPM DKTTPAPPPV PSANDNASNK PKVTLQALNL PMFTQISQAS
110 120 130 140 150
ATTEAPNIQA SVTSQTQKAK TMRVTPKVSL TGSEDATTQL KPPLQALNLP
160 170 180 190 200
VTTPTIQTPV ANESANSLAS TAVNKSKKAS TANNAANKTV PSAAEISLAS
210 220 230 240 250
AATHTVTTQG QAAKETGSIQ TIAATARSKK NSKGKRTPAK TTNTDNEYVE
260 270 280 290 300
ASNAIEASSR QIGASGRQTE ASNRQIEASS RQTEASNRQT EASSRQTEAS
310 320 330 340 350
SRQTETSNRQ IGASNRQIMA SNRQIGASNR QIEASNRQIG ASNRQTEVSS
360 370 380 390 400
RQIEASNRQI GASNRQTEAS NRQIGASNRQ TEASNRQIGA SNRQTDASNR
410 420 430 440 450
QTDASNRQTE ASSRQTEASS RQTEASSRQT EASSRQIEAS AAAVRPKKPR
460 470 480 490 500
GKKGNNKGSN SASEPSEAPP AIQTVTNHAL SVTVRIRRGS RARKAANKNR
510 520 530 540 550
ATESQAQIAE QGAQASEASI SALETQVAAA VQALADDYLA QLSLEPTTRT
560 570 580 590 600
RGKRNRKSKH PNGEERTGNN YRRIPWGRRL PPPRDVAILQ ERANKLVKYL
610 620 630 640 650
LVKDQTKIPI KRSDMLKDVI QEYEDYFPEI IERASYALEK MFRVNLKEID
660 670 680 690 700
KQNNLYILIS TQESSAGIMG TTKDTPKLGL LMVILSVIFM NGNKASEAVI
710 720 730 740 750
WEVLRKLGLH PGVKHSLFGE VKKLITDEFV KQKYLEYKRV PNSRPPEYEF
760 770 780 790 800
FWGLRSYHET SKMKVLKFAC KVQKKDPKDW AAQYREAVEM DIQAAAVAVA
810 820 830 840 850
EAKARAEARA QMGIGEEAVA GPWNWDDMDI NCLTREELGD DAQAWSRFSF
860 870 880 890 900
EIEPRAQENA DPTTNVLFNQ GATTRNSFSD GAGISFGGIT NPSGGFGGIS
910 920 930 940 950
NPSGGFGGIS NPSGGFGGIS NPSGGFGGIS NPSGGFGGIS NPSGGFGGIS
960 970 980 990 1000
NPSGGFGGIS NPSGGFGGIS NPSGGFGGIS NPSGGFGGIS NPSGGFGGIS
1010 1020 1030 1040 1050
NPSGGFGGIS NPSGGFGGIS NPSGGFGGRN SITFGSVPNT SANFSSAPSI
1060 1070 1080 1090 1100
SFGDTPNTST SFSGGANSSF SGTPSTSAPF CNTASISFGG APSTSTSFST
1110 1120 1130 1140 1150
ASISFGGAPS TSTSLSTASI SFGGAPSTST SFSTASISFG GAPSTSTSLS
1160 1170 1180 1190 1200
TASISFGGAP SINSSSGGSS VSFGGAPTTS TSFSGGPCIS FGGAPCTTAS
1210 1220 1230 1240 1250
ISGGASSGFG STLCSTNPGF SALSTNTSFG SAPTTSTVFS GAVSTTTGFG
1260 1270 1280 1290 1300
GTLSTSVCFG SSPYSGAGFG GTLSTSISFG GSPSTNTGFG GTLSTSVSFG
1310 1320 1330 1340 1350
ASSSTSSDFG GTLSTSVSFG GSSGANAGFG GTLNSSTSFG GAISTSTGFG
1360 1370 1380 1390 1400
SALNNSANFG GAISTSFSGV LNSSASFGGA INTSAGFGST LNSSASFGSA
1410 1420 1430 1440 1450
LSTSASFGGV LNGSAGFGGA LNTNATFGGV LNGSAGFGGA MNTNATFGGA
1460 1470 1480 1490 1500
LNSNAGFGGA ISTSTNFGGA LNNSAGFGGA MNTSASFGGA LNNSAGFGGA
1510 1520 1530 1540 1550
ISTNATFGGA LNNSAGFGGA ISTNATFGGA LNNSAGFGGA ISTSASFGGT
1560 1570 1580 1590 1600
LNNSASFGGA INTSASFGGV LNNSAGFGGA INTSANFGGA LTNSAGFGGA
1610 1620 1630 1640 1650
ISTSASFGGA LNNSAGFGGA ISTSASFGGA LNNSAGFGGA ISTNASFGGA
1660 1670 1680 1690 1700
ISNSPDFGGA FSTSVGFGGT LNTTDFGSTH SNSISFGSAP TTSVSFGGSH
1710 1720 1730 1740 1750
STNLCFGGAP STSLCFGSAS NTNLCFGGSN STNCFSGATS ANFNEGHSIS
1760 1770 1780 1790 1800
FGNGLSTSAG FGNGLGTSAG FGSSLGTSTG FGGSLGPSAS FNGGLGTSTG
1810 1820 1830 1840 1850
FGGGLGTSTD FSGGLNHNAD FNGGLGNSAG FNGGLNTNTD FGGELGTSAG
1860 1870 1880 1890 1900
FGDGLGSSTS FGAGLVTSDG FAGNLGTNTG FGGTLGTGAG FSVSLNNGNG
1910 1920 1930 1940 1950
FGNGPNASFN RGLNTIIGFG SGSNTSNGFT GEPNTGSSFS NGPSSIVGFS
1960 1970 1980 1990 2000
GGPSTGAGFC SGPSTGGFGG GPSTGPGFGG PSTGPGFGGP STGGGFGGPN
2010 2020 2030 2040 2050
TGGGFGGPST GGGFGGPSTG GGFGGPSTGG GFGGPSTAAG FGSGLSTSTG
2060 2070 2080
FGGGLNTSAG FSGGPPSTGT GFGGGASSHG GCGFPYG
Computationally mapped potential isoform sequencesi
There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketE9Q160 | E9Q160_MOUSE | Trophinin | Tro | 802 | Annotation score: | ||
E9Q098 | E9Q098_MOUSE | Trophinin | Tro | 838 | Annotation score: | ||
E9Q886 | E9Q886_MOUSE | Trophinin | Tro | 972 | Annotation score: | ||
E9Q1Q4 | E9Q1Q4_MOUSE | Trophinin | Tro | 296 | Annotation score: | ||
A2AFN3 | A2AFN3_MOUSE | Trophinin | Tro | 560 | Annotation score: | ||
E9Q1E1 | E9Q1E1_MOUSE | Trophinin | Tro | 35 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL672150 Genomic DNA No translation available. BC075630 mRNA Translation: AAH75630.1 |
RefSeqi | NP_001002272.1, NM_001002272.3 NP_001277699.1, NM_001290770.1 XP_006528979.1, XM_006528916.3 XP_011246147.1, XM_011247845.2 XP_011246148.1, XM_011247846.1 |
Genome annotation databases
Ensembli | ENSMUST00000087258; ENSMUSP00000084513; ENSMUSG00000025272 ENSMUST00000112709; ENSMUSP00000108329; ENSMUSG00000025272 |
GeneIDi | 56191 |
KEGGi | mmu:56191 |
UCSCi | uc057atd.1, mouse |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL672150 Genomic DNA No translation available. BC075630 mRNA Translation: AAH75630.1 |
RefSeqi | NP_001002272.1, NM_001002272.3 NP_001277699.1, NM_001290770.1 XP_006528979.1, XM_006528916.3 XP_011246147.1, XM_011247845.2 XP_011246148.1, XM_011247846.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 10090.ENSMUSP00000084513 |
Proteomic databases
ProteomicsDBi | 337055 |
Protocols and materials databases
Antibodypediai | 62228, 55 antibodies |
DNASUi | 56191 |
Genome annotation databases
Ensembli | ENSMUST00000087258; ENSMUSP00000084513; ENSMUSG00000025272 ENSMUST00000112709; ENSMUSP00000108329; ENSMUSG00000025272 |
GeneIDi | 56191 |
KEGGi | mmu:56191 |
UCSCi | uc057atd.1, mouse |
Organism-specific databases
CTDi | 7216 |
MGIi | MGI:1928994, Tro |
Phylogenomic databases
eggNOGi | KOG4562, Eukaryota |
GeneTreei | ENSGT00940000162763 |
HOGENOMi | CLU_001549_0_0_1 |
OrthoDBi | 1195799at2759 |
TreeFami | TF352132 |
Miscellaneous databases
BioGRID-ORCSi | 56191, 1 hit in 52 CRISPR screens |
ChiTaRSi | Tro, mouse |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000025272, Expressed in amygdala and 233 other tissues |
Family and domain databases
Gene3Di | 1.10.10.1200, 1 hit 1.10.10.1210, 1 hit |
InterProi | View protein in InterPro IPR037445, MAGE IPR041898, MAGE_WH1 IPR041899, MAGE_WH2 IPR002190, MHD_dom |
PANTHERi | PTHR11736, PTHR11736, 2 hits |
Pfami | View protein in Pfam PF01454, MAGE, 1 hit |
SMARTi | View protein in SMART SM01373, MAGE, 1 hit |
PROSITEi | View protein in PROSITE PS50838, MAGE, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q6DIC6_MOUSE | |
Accessioni | Q6DIC6Primary (citable) accession number: Q6DIC6 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | August 16, 2004 |
Last sequence update: | August 16, 2004 | |
Last modified: | April 7, 2021 | |
This is version 113 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |