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Protein
Submitted name:

Zgc:92606

Gene

zgc:92606

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • GABA receptor binding Source: GO_Central

GO - Biological processi

Keywordsi

Biological processAutophagyUniRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-DRE-1632852 Macroautophagy

Names & Taxonomyi

Protein namesi
Submitted name:
Zgc:92606Imported
Gene namesi
ORF Names:zgc:92606Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 16

Organism-specific databases

ZFINiZDB-GENE-040718-462 zgc:92606

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi116Phosphatidylethanolamine amidated glycineUniRule annotation1

Keywords - PTMi

LipoproteinUniRule annotation

Expressioni

Gene expression databases

BgeeiENSDARG00000040971 Expressed in 29 organ(s), highest expression level in head

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000116923

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1654 Eukaryota
ENOG4111JAT LUCA
GeneTreeiENSGT00390000012937
HOGENOMiHOG000232034
HOVERGENiHBG051706
OMAiGQLCFLI
OrthoDBiEOG091G10AA
TreeFamiTF314556

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit

Sequencei

Sequence statusi: Complete.

Q6DH82-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSQYQRSVP LEVRRAEGER VRAKHPDKIP IIVERAARSR APELDKKKYL
60 70 80 90 100
VPSDLTVGQL CFLIRQRVSM RPEEALFFFV KNSLPPSSSP LSAVYEEHHE
110
EDLFLYMTYS NESVYGA
Length:117
Mass (Da):13,515
Last modified:August 16, 2004 - v1
Checksum:i596FB12576B056B0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX001019 Genomic DNA No translation available.
CR388102 Genomic DNA No translation available.
BC076097 mRNA Translation: AAH76097.1
BC171503 mRNA Translation: AAI71503.1
RefSeqiNP_001002707.1, NM_001002707.2
UniGeneiDr.81055

Genome annotation databases

EnsembliENSDART00000060037; ENSDARP00000060036; ENSDARG00000040971
ENSDART00000133430; ENSDARP00000116923; ENSDARG00000040971
ENSDART00000182633; ENSDARP00000155317; ENSDARG00000114660
GeneIDi100000242
KEGGidre:100000242

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX001019 Genomic DNA No translation available.
CR388102 Genomic DNA No translation available.
BC076097 mRNA Translation: AAH76097.1
BC171503 mRNA Translation: AAI71503.1
RefSeqiNP_001002707.1, NM_001002707.2
UniGeneiDr.81055

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000116923

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000060037; ENSDARP00000060036; ENSDARG00000040971
ENSDART00000133430; ENSDARP00000116923; ENSDARG00000040971
ENSDART00000182633; ENSDARP00000155317; ENSDARG00000114660
GeneIDi100000242
KEGGidre:100000242

Organism-specific databases

ZFINiZDB-GENE-040718-462 zgc:92606

Phylogenomic databases

eggNOGiKOG1654 Eukaryota
ENOG4111JAT LUCA
GeneTreeiENSGT00390000012937
HOGENOMiHOG000232034
HOVERGENiHBG051706
OMAiGQLCFLI
OrthoDBiEOG091G10AA
TreeFamiTF314556

Enzyme and pathway databases

ReactomeiR-DRE-1632852 Macroautophagy

Gene expression databases

BgeeiENSDARG00000040971 Expressed in 29 organ(s), highest expression level in head

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ6DH82_DANRE
AccessioniPrimary (citable) accession number: Q6DH82
Entry historyiIntegrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: November 7, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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