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Protein

Vasculin

Gene

gpbp1

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Functions as a GC-rich promoter-specific transactivating transcription factor.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Vasculin
Alternative name(s):
GC-rich promoter-binding protein 1
Gene namesi
Name:gpbp1
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-6255346 gpbp1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003241131 – 371VasculinAdd BLAST371

Family & Domainsi

Sequence similaritiesi

Belongs to the vasculin family.Curated

Phylogenomic databases

HOVERGENiHBG056980

Family and domain databases

InterProiView protein in InterPro
IPR028128 Vasculin_fam
PfamiView protein in Pfam
PF15337 Vasculin, 1 hit

Sequencei

Sequence statusi: Complete.

Q6DD19-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAQHDFAPAW LNFPTPPPST KPFLYAEKRS ESLGRSDCAF NVNRQRHNSS
60 70 80 90 100
EAFDSSFGGN LKKREKNVWR PQSRSAAEPT WQREASLHLY SSNLQRVNSQ
110 120 130 140 150
LRSERNTSEF DLTRSLDRED CKTFEAEDFS FLYPEHERGK KLFTARLWEY
160 170 180 190 200
PMNAGSTSPQ MLGIKKGLMD DFSLSGYSIG VGNQSLPDKH WAGIKKEECK
210 220 230 240 250
SLSKDNNIGS FYQDCPPENY IPNTSLHAEL LSVDPCSLEE EEDTHLNNRN
260 270 280 290 300
DSCPEMDINL NFDENENSED NVNTLISGQI SPAYAQDGVL SSSLEAEFKL
310 320 330 340 350
LREMGWQEND ESCAPLTEDE MREFQAISEQ LQKNGLRKHV FLRDALAFDL
360 370
FQDAVQKEDS ETSSSDTSDD E
Length:371
Mass (Da):42,247
Last modified:August 16, 2004 - v1
Checksum:i3228CA74772EECC5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC077810 mRNA Translation: AAH77810.1
RefSeqiNP_001086947.1, NM_001093478.1
UniGeneiXl.10420

Genome annotation databases

GeneIDi446782
KEGGixla:446782

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC077810 mRNA Translation: AAH77810.1
RefSeqiNP_001086947.1, NM_001093478.1
UniGeneiXl.10420

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi446782
KEGGixla:446782

Organism-specific databases

CTDi446782
XenbaseiXB-GENE-6255346 gpbp1

Phylogenomic databases

HOVERGENiHBG056980

Family and domain databases

InterProiView protein in InterPro
IPR028128 Vasculin_fam
PfamiView protein in Pfam
PF15337 Vasculin, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiGPBP1_XENLA
AccessioniPrimary (citable) accession number: Q6DD19
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 18, 2008
Last sequence update: August 16, 2004
Last modified: September 12, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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