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Protein

Ribose import ATP-binding protein RbsA

Gene

rbsA

Organism
Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system.UniRule annotation

Catalytic activityi

ATP + H2O + monosaccharide(Out) = ADP + phosphate + monosaccharide(In).UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi37 – 44ATPUniRule annotation8

GO - Molecular functioni

Keywordsi

Molecular functionHydrolase
Biological processSugar transport, Transport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciPATR218491:G1G3T-11-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Ribose import ATP-binding protein RbsAUniRule annotation (EC:3.6.3.17UniRule annotation)
Gene namesi
Name:rbsAUniRule annotation
Ordered Locus Names:ECA0011
OrganismiPectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)
Taxonomic identifieri218491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesPectobacteriaceaePectobacterium
Proteomesi
  • UP000007966 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002610621 – 501Ribose import ATP-binding protein RbsAAdd BLAST501

Proteomic databases

PRIDEiQ6DB87

Interactioni

Subunit structurei

The complex is composed of an ATP-binding protein (RbsA), two transmembrane proteins (RbsC) and a solute-binding protein (RbsB).UniRule annotation

Protein-protein interaction databases

STRINGi218491.ECA0011

Structurei

3D structure databases

ProteinModelPortaliQ6DB87
SMRiQ6DB87
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 241ABC transporter 1UniRule annotationAdd BLAST237
Domaini252 – 495ABC transporter 2UniRule annotationAdd BLAST244

Sequence similaritiesi

Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. [View classification]UniRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4105C2J Bacteria
COG1129 LUCA
KOiK10441
OMAiVRNFSVY
OrthoDBiPOG091H0FLI

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR015861 ABC_transpr_RbsA
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00005 ABC_tran, 2 hits
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit
PS51254 RBSA, 1 hit

Sequencei

Sequence statusi: Complete.

Q6DB87-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQPLLQLQGI TKSFPGVKAL SGAALNVYPG KVMALVGENG AGKSTMMKVL
60 70 80 90 100
TGIYRKDAGS IHFLGQEVDF NGPKASQEAG IGIIHQELNL IPQLTIAENI
110 120 130 140 150
FLGREFTNRF GRIDWNKMYA EADKLLKRLN LRYDSRRMVG DLSIGDQQMV
160 170 180 190 200
EIAKVLSFES KVIIMDEPTD ALTDTETASL FSVINELQSQ GCGIVYISHR
210 220 230 240 250
LKEIFEICDD ITVFRDGQFI GERPVSDLEE DTLIEMMVGR KLEDQYPRSN
260 270 280 290 300
KAPGEVRLKV QNLSGPGVDS VSFTVRKGEI LGVAGLMGAG RTELMKILYG
310 320 330 340 350
ALPRTGGNVT LDGRDVVTRK PQDGLANGIV YISEDRKRDG LVLGMSVKEN
360 370 380 390 400
MSLTALRYFS HAGGRLKHAE EQLTVADFIR LFNVKTPSME QPIGLLSGGN
410 420 430 440 450
QQKVAIARGL MTRPNVLILD EPTRGVDVGA KKEIYQLINQ FKEEGLSIIL
460 470 480 490 500
VSSEMPEVLG MSDRIIVMHE GRLSGDFPIE QATQEALMAA AVGKQYGAKQ

E
Length:501
Mass (Da):55,020
Last modified:August 16, 2004 - v1
Checksum:iCDBF9BC73AA879B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950851 Genomic DNA Translation: CAG72935.1
RefSeqiWP_011091660.1, NC_004547.2

Genome annotation databases

EnsemblBacteriaiCAG72935; CAG72935; ECA0011
KEGGieca:ECA0011
PATRICifig|218491.5.peg.11

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950851 Genomic DNA Translation: CAG72935.1
RefSeqiWP_011091660.1, NC_004547.2

3D structure databases

ProteinModelPortaliQ6DB87
SMRiQ6DB87
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi218491.ECA0011

Proteomic databases

PRIDEiQ6DB87

Protocols and materials databases

DNASUi2884518
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG72935; CAG72935; ECA0011
KEGGieca:ECA0011
PATRICifig|218491.5.peg.11

Phylogenomic databases

eggNOGiENOG4105C2J Bacteria
COG1129 LUCA
KOiK10441
OMAiVRNFSVY
OrthoDBiPOG091H0FLI

Enzyme and pathway databases

BioCyciPATR218491:G1G3T-11-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR015861 ABC_transpr_RbsA
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00005 ABC_tran, 2 hits
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit
PS51254 RBSA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRBSA_PECAS
AccessioniPrimary (citable) accession number: Q6DB87
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 16, 2004
Last modified: November 7, 2018
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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