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Protein

Permease IIC component

Gene

licC

Organism
Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processSugar transportUniRule annotationSAAS annotation, Transport

Enzyme and pathway databases

BioCyciPATR218491:G1G3T-3744-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Permease IIC componentUniRule annotation
Gene namesi
Name:licCImported
Ordered Locus Names:ECA3647Imported
OrganismiPectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)Imported
Taxonomic identifieri218491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesPectobacteriaceaePectobacterium
Proteomesi
  • UP000007966 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei31 – 52HelicalSequence analysisAdd BLAST22
Transmembranei72 – 94HelicalSequence analysisAdd BLAST23
Transmembranei106 – 128HelicalSequence analysisAdd BLAST23
Transmembranei148 – 164HelicalSequence analysisAdd BLAST17
Transmembranei185 – 211HelicalSequence analysisAdd BLAST27
Transmembranei231 – 253HelicalSequence analysisAdd BLAST23
Transmembranei265 – 283HelicalSequence analysisAdd BLAST19
Transmembranei295 – 316HelicalSequence analysisAdd BLAST22
Transmembranei351 – 371HelicalSequence analysisAdd BLAST21
Transmembranei391 – 419HelicalSequence analysisAdd BLAST29

GO - Cellular componenti

Keywords - Cellular componenti

Cell membraneUniRule annotationSAAS annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi218491.ECA3647

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 421PTS EIIC type-3InterPro annotationAdd BLAST415

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili424 – 444Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CK1 Bacteria
COG1455 LUCA
HOGENOMiHOG000224102
KOiK02761
OMAiQLFWVIG
OrthoDBiPOG091H03DY

Family and domain databases

InterProiView protein in InterPro
IPR003352 PTS_EIIC
IPR004501 PTS_EIIC_3
IPR004796 PTS_IIC_cello
PfamiView protein in Pfam
PF02378 PTS_EIIC, 1 hit
PIRSFiPIRSF006351 PTS_EIIC-Cellobiose, 1 hit
TIGRFAMsiTIGR00410 lacE, 1 hit
PROSITEiView protein in PROSITE
PS51105 PTS_EIIC_TYPE_3, 1 hit

Sequencei

Sequence statusi: Complete.

Q6D101-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSFKDQLIDS LGSFANKFNS LRYIMAIKAS FITLMPVIIV GAFSVLISNM
60 70 80 90 100
VMDPKNGLAS FSMFSFLAEL KPIMSGINYA TLSFLTIGAV FLIGIELGKI
110 120 130 140 150
NGSRGLFPGL LAVICFIAVT PTTIEMAVNG QMMVVKDVLA KQFSDTKSLF
160 170 180 190 200
LGMFIAILSV EMYTRLESVD RLRIKMPDSV PPNVAASFSA LFPSIITVVA
210 220 230 240 250
IATFGFVFHR VTGMYLYDAV YQVVQQPLES VVQSLPGLLV LMFVAQLFWV
260 270 280 290 300
IGIHGNQMIK PIREPLLLGA IAVNMTAFEQ GLEVPNIITM PFWDVYMSIG
310 320 330 340 350
GSGLTIGLLM AVMIASKRKE MKEIAKISFG PSVFNINEPV IFGMPIMLNP
360 370 380 390 400
ILAIPFIITP LVTGTIGYFA TSMGFAGKAV VMVPWTTPPI INAWLSTAGS
410 420 430 440
MGAVATQIVC IIVAMLIYLP FVKVASRRAE LAQLEAEKQA AAKKA
Length:445
Mass (Da):48,261
Last modified:August 16, 2004 - v1
Checksum:iC4A49C6357F78C96
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950851 Genomic DNA Translation: CAG76545.1
RefSeqiWP_011095148.1, NC_004547.2

Genome annotation databases

EnsemblBacteriaiCAG76545; CAG76545; ECA3647
KEGGieca:ECA3647
PATRICifig|218491.5.peg.3701

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX950851 Genomic DNA Translation: CAG76545.1
RefSeqiWP_011095148.1, NC_004547.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi218491.ECA3647

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG76545; CAG76545; ECA3647
KEGGieca:ECA3647
PATRICifig|218491.5.peg.3701

Phylogenomic databases

eggNOGiENOG4105CK1 Bacteria
COG1455 LUCA
HOGENOMiHOG000224102
KOiK02761
OMAiQLFWVIG
OrthoDBiPOG091H03DY

Enzyme and pathway databases

BioCyciPATR218491:G1G3T-3744-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR003352 PTS_EIIC
IPR004501 PTS_EIIC_3
IPR004796 PTS_IIC_cello
PfamiView protein in Pfam
PF02378 PTS_EIIC, 1 hit
PIRSFiPIRSF006351 PTS_EIIC-Cellobiose, 1 hit
TIGRFAMsiTIGR00410 lacE, 1 hit
PROSITEiView protein in PROSITE
PS51105 PTS_EIIC_TYPE_3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ6D101_PECAS
AccessioniPrimary (citable) accession number: Q6D101
Entry historyiIntegrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: February 28, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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