UniProtKB - Q6BYC4 (UTP25_DEBHA)
Protein
U3 small nucleolar RNA-associated protein 25
Gene
UTP25
Organism
Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii)
Status
Functioni
DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.By similarity
GO - Molecular functioni
- rRNA binding Source: EnsemblFungi
- U3 snoRNA binding Source: EnsemblFungi
GO - Biological processi
- maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Source: EnsemblFungi
Keywordsi
Molecular function | Ribonucleoprotein |
Biological process | Ribosome biogenesis, rRNA processing |
Names & Taxonomyi
Protein namesi | Recommended name: U3 small nucleolar RNA-associated protein 25Short name: U3 snoRNA-associated protein 25 Alternative name(s): U three protein 25 |
Gene namesi | Name:UTP25 Ordered Locus Names:DEHA2A10626g |
Organismi | Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii) |
Taxonomic identifieri | 284592 [NCBI] |
Taxonomic lineagei | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Debaryomyces › |
Proteomesi |
|
Subcellular locationi
Nucleus
- nucleolus By similarity
Nucleus
- nucleolus Source: UniProtKB-SubCell
Other locations
- small-subunit processome Source: EnsemblFungi
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000408116 | 1 – 719 | U3 small nucleolar RNA-associated protein 25Add BLAST | 719 |
Interactioni
Subunit structurei
Component of the ribosomal small subunit (SSU) processome composed of at least 40 protein subunits and snoRNA U3.
By similarityProtein-protein interaction databases
STRINGi | 4959.XP_456795.2 |
Family & Domainsi
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 67 – 155 | Asp-richAdd BLAST | 89 |
Sequence similaritiesi
Belongs to the UTP25 family.Curated
Phylogenomic databases
eggNOGi | KOG2340, Eukaryota |
HOGENOMi | CLU_018705_0_1_1 |
InParanoidi | Q6BYC4 |
OMAi | HALNHVF |
OrthoDBi | 257318at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR010678, Digest_organ_expansion_fac-prd |
PANTHERi | PTHR12933, PTHR12933, 1 hit |
Pfami | View protein in Pfam PF06862, UTP25, 1 hit |
i Sequence
Sequence statusi: Complete.
Q6BYC4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MPAPYKRKKH SGKRPEDSHD AKRPKQKHGR QEMRTITRTA RRVRRDEEGE
60 70 80 90 100
EDEQVEENVN EELESQDDDI EDGGDIDDDK GKAYDALLTL LSGDHQEDTK
110 120 130 140 150
KNTSVRAEPE QTQESESESD EDSGDDEIAG ANVDDDKDVD EEGPEEDDGD
160 170 180 190 200
DDQQDPFEVH FNQVSDTFIE EQEKVLKDKP KWTFADKKSM EDAGYTYTFQ
210 220 230 240 250
VPPNPIKTGG KVKGQSVNNY SIKQRLVSPF EKQHPESLNE LEGVLLDSMV
260 270 280 290 300
KYQDINYVYK TFDNESYKKL YVLHALNHIF KTRDRILKNN NKLHSYQESM
310 320 330 340 350
KKGKTNIEEP ELRDQGFTRP KVLILLPTRN ACYEIVELLI KLCGSEQQEN
360 370 380 390 400
RKKFNKQFSS KETPPDSKPE DFKHSFKGNN NDFFCIGVKF TRKSLKLYSS
410 420 430 440 450
FYSSDIIIAS PIGLSMILEN PDKKKRQYDF LSSIEVLVVD RANQIEMQNW
460 470 480 490 500
DHVNTVFKYL NKIPKDFHDA DFSRIRMWSI NDQANLLRQN LVFSEFSTPN
510 520 530 540 550
INNIVSSKSS NLSGKLRFKP VTTSKNCIMN SIGLKLKQIF QRFESNSPMT
560 570 580 590 600
DPESRFKFFI NSVLPSLTRS TSYDDGLLIF IPSYYDYLRI KNYMKTSTKF
610 620 630 640 650
TFASIDEYTS QSKLSRNRQQ FASGKIKIML YTERLHHFRR FEINGVKNLL
660 670 680 690 700
MYGLPSNPIF YKELVRFIGK SVFREIADLD LSFIKILYSK WDAVALERIV
710
GNERAPVLCN SVNEMYEFR
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CR382133 Genomic DNA Translation: CAG84764.2 |
RefSeqi | XP_456795.2, XM_456795.1 |
Genome annotation databases
EnsemblFungii | CAG84764; CAG84764; DEHA2A10626g |
GeneIDi | 2899564 |
KEGGi | dha:DEHA2A10626g |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CR382133 Genomic DNA Translation: CAG84764.2 |
RefSeqi | XP_456795.2, XM_456795.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 4959.XP_456795.2 |
Genome annotation databases
EnsemblFungii | CAG84764; CAG84764; DEHA2A10626g |
GeneIDi | 2899564 |
KEGGi | dha:DEHA2A10626g |
Phylogenomic databases
eggNOGi | KOG2340, Eukaryota |
HOGENOMi | CLU_018705_0_1_1 |
InParanoidi | Q6BYC4 |
OMAi | HALNHVF |
OrthoDBi | 257318at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR010678, Digest_organ_expansion_fac-prd |
PANTHERi | PTHR12933, PTHR12933, 1 hit |
Pfami | View protein in Pfam PF06862, UTP25, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | UTP25_DEBHA | |
Accessioni | Q6BYC4Primary (citable) accession number: Q6BYC4 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 3, 2011 |
Last sequence update: | November 4, 2008 | |
Last modified: | December 2, 2020 | |
This is version 70 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Fungal Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families