UniProtKB - Q6BMZ5 (SLX9_DEBHA)
Protein
Ribosome biogenesis protein SLX9
Gene
SLX9
Organism
Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii)
Status
Functioni
Involved in ribosome biogenesis. Required for normal pre-rRNA processing in internal transcribed spacer 1 (ITS1). May be involved in the movements of the replication forks (By similarity).By similarity
GO - Biological processi
- maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Source: InterPro
Keywordsi
Biological process | Ribosome biogenesis, rRNA processing |
Names & Taxonomyi
Protein namesi | Recommended name: Ribosome biogenesis protein SLX9 |
Gene namesi | Name:SLX9 Ordered Locus Names:DEHA2F01430g |
Organismi | Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii) |
Taxonomic identifieri | 284592 [NCBI] |
Taxonomic lineagei | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Debaryomyces › |
Proteomesi |
|
Subcellular locationi
Nucleus
- nucleolus By similarity
Nucleus
- nucleolus Source: UniProtKB-SubCell
Other locations
- 90S preribosome Source: InterPro
- preribosome, small subunit precursor Source: InterPro
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000333449 | 1 – 188 | Ribosome biogenesis protein SLX9Add BLAST | 188 |
Interactioni
Subunit structurei
Interacts with the 35S, 23S and 20S pre-rRNAs and with the U3 snoRNA.
By similarityProtein-protein interaction databases
STRINGi | 4959.XP_460425.2 |
Family & Domainsi
Sequence similaritiesi
Belongs to the SLX9 family.Curated
Phylogenomic databases
eggNOGi | ENOG502S2IS, Eukaryota |
HOGENOMi | CLU_126135_0_0_1 |
InParanoidi | Q6BMZ5 |
OMAi | LKPKMQD |
OrthoDBi | 1594718at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR028160, Slx9-like |
Pfami | View protein in Pfam PF15341, SLX9, 1 hit |
i Sequence
Sequence statusi: Complete.
Q6BMZ5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAVKKRTTLR DKHAKSNTKS NLSGKIAELK EENNGQESDY HENPFLKLSK
60 70 80 90 100
VTKKDKQLNK SQNFSQKFDS STLNTSSNIS KSALRRRKRN ARNELKPKMD
110 120 130 140 150
ELLQNLPETT NVIDPSAAAH KPNDHKSTKF IKSTKASANL PNATKQTGHA
160 170 180
KIMTQESKNF TNVLKNPQFR SSPFSALKDA IAQNIQNQ
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CR382138 Genomic DNA Translation: CAG88732.2 |
RefSeqi | XP_460425.2, XM_460425.2 |
Genome annotation databases
EnsemblFungii | CAG88732; CAG88732; DEHA2F01430g |
GeneIDi | 2903828 |
KEGGi | dha:DEHA2F01430g |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | CR382138 Genomic DNA Translation: CAG88732.2 |
RefSeqi | XP_460425.2, XM_460425.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 4959.XP_460425.2 |
Genome annotation databases
EnsemblFungii | CAG88732; CAG88732; DEHA2F01430g |
GeneIDi | 2903828 |
KEGGi | dha:DEHA2F01430g |
Phylogenomic databases
eggNOGi | ENOG502S2IS, Eukaryota |
HOGENOMi | CLU_126135_0_0_1 |
InParanoidi | Q6BMZ5 |
OMAi | LKPKMQD |
OrthoDBi | 1594718at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR028160, Slx9-like |
Pfami | View protein in Pfam PF15341, SLX9, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | SLX9_DEBHA | |
Accessioni | Q6BMZ5Primary (citable) accession number: Q6BMZ5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 20, 2008 |
Last sequence update: | December 16, 2008 | |
Last modified: | December 2, 2020 | |
This is version 65 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Fungal Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families