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Protein
Submitted name:

Fc fragment of IgE receptor II

Gene

Fcer2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorImported
LigandLectinSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Fc fragment of IgE receptor IIImported
Submitted name:
Fc of IgE, low affinity II, receptor for (CD23)Imported
Submitted name:
Fc receptor, IgE, low affinity II, alpha polypeptide, isoform CRA_aImported
Gene namesi
Name:Fcer2Imported
Synonyms:Fcer2aImported
ORF Names:rCG_58902Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 12

Organism-specific databases

RGDi619997 Fcer2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei26 – 49HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Expressioni

Gene expression databases

BgeeiENSRNOG00000001005 Expressed in 8 organ(s), highest expression level in spleen

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000001332

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini193 – 296C-type lectinInterPro annotationAdd BLAST104

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili87 – 167Sequence analysisAdd BLAST81

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IS34 Eukaryota
ENOG410XZ77 LUCA
GeneTreeiENSGT00760000118924
HOGENOMiHOG000089951
HOVERGENiHBG051599
KOiK06468
OMAiGQWNDAF
OrthoDBiEOG091G0KN3
TreeFamiTF333341

Family and domain databases

CDDicd03590 CLECT_DC-SIGN_like, 1 hit
Gene3Di3.10.100.10, 1 hit
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR018378 C-type_lectin_CS
IPR033989 CD209-like_CTLD
IPR016187 CTDL_fold
PfamiView protein in Pfam
PF00059 Lectin_C, 1 hit
SMARTiView protein in SMART
SM00034 CLECT, 1 hit
SUPFAMiSSF56436 SSF56436, 1 hit
PROSITEiView protein in PROSITE
PS00615 C_TYPE_LECTIN_1, 1 hit
PS50041 C_TYPE_LECTIN_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.iShow all

Q6AZ45-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEENEYSGYW EPPRRRCCCA RRGTQLVLVG LLTTVMWAGL LALLLLWHWE
60 70 80 90 100
TEKSLKQLGD AAIQNVSHVT KDLQNYQSNQ LAQKSQALQM SQNLEELQAE
110 120 130 140 150
QKQMKSQDSQ LSQNLNELQE DLINVKSQNS ELSQNLNTLQ EDLVNVKSQG
160 170 180 190 200
LNEKRAASDS LEKLQEEVAK LWIEILMSKG TACNVCPKDW LHFQQKCYYF
210 220 230 240 250
GEGSKQWIQA KFTCSDLEGR LVSIHSQKEQ DFLMQHINKK ESWIGLQDLN
260 270 280 290 300
MEGEFVWPDG SPVGYSNWSP GEPNNGGQGE DCVMMRGSGQ WNDAFCRSYL
310 320 330
DAWVCEQLAT CDLSAPLASV TPTGPTPKNE P
Length:331
Mass (Da):37,526
Last modified:September 13, 2004 - v1
Checksum:iE09C58A03F9D100F
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
G3V638G3V638_RAT
Fc fragment of IgE receptor II
Fcer2 Fcer2a, rCG_58902
310Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07034962 Genomic DNA No translation available.
BC078749 mRNA Translation: AAH78749.1
CH474084 Genomic DNA Translation: EDL74959.1
RefSeqiNP_001029096.1, NM_001033924.1
NP_598234.2, NM_133550.2
UniGeneiRn.10326

Genome annotation databases

EnsembliENSRNOT00000001332; ENSRNOP00000001332; ENSRNOG00000001005
GeneIDi171075
KEGGirno:171075

Similar proteinsi

Entry informationi

Entry nameiQ6AZ45_RAT
AccessioniPrimary (citable) accession number: Q6AZ45
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: September 12, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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