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Protein
Submitted name:

Poly(rC)-binding protein 2

Gene

Pcbp2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Poly(rC)-binding protein 2Imported
Gene namesi
Name:Pcbp2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1309626 Pcbp2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiQ6AYU5

Expressioni

Gene expression databases

BgeeiENSRNOG00000036852
ExpressionAtlasiQ6AYU5 baseline and differential

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiQ6AYU5, 1 interactor
STRINGi10116.ENSRNOP00000052173

Structurei

3D structure databases

SMRiQ6AYU5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 80KHInterPro annotationAdd BLAST69
Domaini96 – 167KHInterPro annotationAdd BLAST72
Domaini286 – 356KHInterPro annotationAdd BLAST71

Phylogenomic databases

eggNOGiKOG2190 Eukaryota
ENOG410XNN8 LUCA
GeneTreeiENSGT00760000119144
HOVERGENiHBG053520
KOiK13162
OMAiMVASKDM

Family and domain databases

Gene3Di3.30.1370.10, 3 hits
InterProiView protein in InterPro
IPR004087 KH_dom
IPR004088 KH_dom_type_1
IPR036612 KH_dom_type_1_sf
PfamiView protein in Pfam
PF00013 KH_1, 3 hits
SMARTiView protein in SMART
SM00322 KH, 3 hits
SUPFAMiSSF54791 SSF54791, 3 hits

Sequencei

Sequence statusi: Complete.

Q6AYU5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTGVIEGGL NVTLTIRLLM HGKEVGSIIG KKGESVKKMR EESGARINIS
60 70 80 90 100
EGNCPERIIT LAGPTNAIFK AFAMIIDKLE EDISSSMTNS TAASRPPVTL
110 120 130 140 150
RLVVPASQCG SLIGKGGCKI KEIRESTGAQ VQVAGDMLPN STERAITIAG
160 170 180 190 200
IPQSIIECVK QICVVMLETL SQSPPKGVTI PYRPKPSSSP VIFAGGQDRY
210 220 230 240 250
STGSDSASFP HTTPSMCLNP DLEGPPLEAY TIQGQYAIPQ PDLTKLHQLA
260 270 280 290 300
MQQSHFPMTH GNTGFSGIES SSPEVKGYWG LDASAQTTSH ELTIPNDLIG
310 320 330 340 350
CIIGRQGAKI NEIRQMSGAQ IKIANPVEGS TDRQVTITGS AASISLAQYL
360
INVRLSSETG GMGSS
Length:365
Mass (Da):38,580
Last modified:September 13, 2004 - v1
Checksum:i43F035D76FDC2C63
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC109743 Genomic DNA No translation available.
BC078906 mRNA Translation: AAH78906.1
RefSeqiNP_001013241.1, NM_001013223.1
UniGeneiRn.106644

Genome annotation databases

EnsembliENSRNOT00000077687; ENSRNOP00000075740; ENSRNOG00000036852
GeneIDi363005
KEGGirno:363005
UCSCiRGD:1309626 rat

Similar proteinsi

Entry informationi

Entry nameiQ6AYU5_RAT
AccessioniPrimary (citable) accession number: Q6AYU5
Secondary accession number(s): D4ACH3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: May 23, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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