Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Snail family transcriptional repressor 1

Gene

Snai1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Snail family transcriptional repressor 1Imported
Submitted name:
Snail homolog 1 (Drosophila)Imported
Gene namesi
Name:Snai1Imported
ORF Names:rCG_32334Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi620758 Snai1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000009594 Expressed in 9 organ(s), highest expression level in lung

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000012939

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini154 – 177C2H2-typeInterPro annotationAdd BLAST24
Domaini180 – 207C2H2-typeInterPro annotationAdd BLAST28
Domaini208 – 235C2H2-typeInterPro annotationAdd BLAST28
Domaini236 – 264C2H2-typeInterPro annotationAdd BLAST29

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2462 Eukaryota
ENOG41106JS LUCA
GeneTreeiENSGT00390000011027
HOGENOMiHOG000261665
HOVERGENiHBG007477
KOiK05707
OMAiPRRKPNY
OrthoDBiEOG091G0Q0V
TreeFamiTF315515

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q6AY35-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPRSFLVRKP SDPRRKPNYS ELQDACVEFT FQQPYDQAHL LAAIPPPEVL
60 70 80 90 100
NPAASLPTLI WDSLLVPQVQ PVAWATLPLR ESPRAAELTS LSDEDSGKSS
110 120 130 140 150
QPPSPPSPAP SSFSSTSASS LEAEAFIAFP GLGQLPKQLA RLSVAKDPQS
160 170 180 190 200
RKAFNCKYCN KEYLSLGALK MHIRSHTLPC VCTTCGKAFS RPWLLQGHVR
210 220 230 240 250
THTGEKPFSC SHCNRAFADR SNLRAHLQTH SDVKRYQCQA CARTFSRMSL
260
LHKHQESGCS GGPR
Length:264
Mass (Da):29,120
Last modified:September 13, 2004 - v1
Checksum:i3B3270F02A70EDF2
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0G2JZU3A0A0G2JZU3_RAT
Snail family transcriptional repres...
Snai1
255Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC131854 Genomic DNA No translation available.
BC079210 mRNA Translation: AAH79210.1
CH474005 Genomic DNA Translation: EDL96401.1
RefSeqiNP_446257.1, NM_053805.1
UniGeneiRn.8008

Genome annotation databases

EnsembliENSRNOT00000012939; ENSRNOP00000012939; ENSRNOG00000009594
GeneIDi116490
KEGGirno:116490

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC131854 Genomic DNA No translation available.
BC079210 mRNA Translation: AAH79210.1
CH474005 Genomic DNA Translation: EDL96401.1
RefSeqiNP_446257.1, NM_053805.1
UniGeneiRn.8008

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000012939

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000012939; ENSRNOP00000012939; ENSRNOG00000009594
GeneIDi116490
KEGGirno:116490

Organism-specific databases

CTDi6615
RGDi620758 Snai1

Phylogenomic databases

eggNOGiKOG2462 Eukaryota
ENOG41106JS LUCA
GeneTreeiENSGT00390000011027
HOGENOMiHOG000261665
HOVERGENiHBG007477
KOiK05707
OMAiPRRKPNY
OrthoDBiEOG091G0Q0V
TreeFamiTF315515

Gene expression databases

BgeeiENSRNOG00000009594 Expressed in 9 organ(s), highest expression level in lung

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiQ6AY35_RAT
AccessioniPrimary (citable) accession number: Q6AY35
Secondary accession number(s): E9PU82
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: November 7, 2018
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again