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Entry version 79 (12 Aug 2020)
Sequence version 1 (13 Sep 2004)
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Protein

Uncharacterized protein C19orf44 homolog

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein C19orf44 homolog
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Rat genome database

More...
RGDi
1311847, RGD1311847

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002919231 – 624Uncharacterized protein C19orf44 homologAdd BLAST624

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei112PhosphoserineBy similarity1
Modified residuei205PhosphoserineCombined sources1

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
Q6AXP1

PRoteomics IDEntifications database

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PRIDEi
Q6AXP1

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6AXP1

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6AXP1

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSRNOG00000023700, Expressed in testis and 19 other tissues

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
ENOG502RMHR, Eukaryota

Ensembl GeneTree

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GeneTreei
ENSGT00390000002505

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

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HOGENOMi
CLU_028158_0_0_1

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
Q6AXP1

Identification of Orthologs from Complete Genome Data

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OMAi
TRREMAV

Database of Orthologous Groups

More...
OrthoDBi
878530at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6AXP1

TreeFam database of animal gene trees

More...
TreeFami
TF330762

Family and domain databases

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR040120, C19orf44-like
IPR027884, DUF4614

The PANTHER Classification System

More...
PANTHERi
PTHR22409, PTHR22409, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15391, DUF4614, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q6AXP1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASTRRPFGP PHGAFDFRDM FFDSSKMEEI RNVQARSLGQ MAPGQSRILK
60 70 80 90 100
RNQTMDEKYL LPKEEALAGT GVRLSLRPPT ISSKSRASEA LRKLAQIETK
110 120 130 140 150
ILKRRQVPTA WSGMESDSTA SERSLPQRTD TTSVSSQYPL RTFQKQVCKT
160 170 180 190 200
SVVGDDGQSG KGSRFLKKKE LPAEARSPVL AAETEKQVLL PTQREPARKY
210 220 230 240 250
DAPDSDEEEM KVLLGSLMES SGEKERNGNQ ELPGTRSDLG KVFLDLTPDQ
260 270 280 290 300
PGVLCLLSAD QSSLKSTSVS LRAQSLQTRS GGDPASLTTS PSILRDDFSR
310 320 330 340 350
SASSKRECIK LASSPSRMET ESSEEPVSEA AADSLHDFRI NILSIDDLVL
360 370 380 390 400
ADGYKSDGEQ KGVTTVVEDE EDLTTEHEIS EHPGASSTAA VWSHSMSSAR
410 420 430 440 450
SMETPTALSV SPVYSEDFEQ FSGPLALEES LDRTLDTLSK FSSGEQTDTV
460 470 480 490 500
SRQPLSRTEW GRGVTRVVKE TAVQTLDPAF AYQWTKAGGM AAIGPTLGGG
510 520 530 540 550
YVDPVPIASH IISADAIEAL TAYSPAVLAL NDMLKQQLSL TQQFIEASHH
560 570 580 590 600
LHHSLLRSLD EDSFHYHTLE EAKEYIRCHR PAPLTMEAAL QEVRKELEVH
610 620
LDINDSHVEA SKAAALPAEP IDGL
Length:624
Mass (Da):68,244
Last modified:September 13, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6AD7C8AE274739DB
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
BC079430 mRNA Translation: AAH79430.1

NCBI Reference Sequences

More...
RefSeqi
NP_001013901.1, NM_001013879.1
XP_006252861.1, XM_006252799.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRNOT00000030617; ENSRNOP00000032342; ENSRNOG00000023700

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
290615

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
rno:290615

UCSC genome browser

More...
UCSCi
RGD:1311847, rat

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079430 mRNA Translation: AAH79430.1
RefSeqiNP_001013901.1, NM_001013879.1
XP_006252861.1, XM_006252799.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

PTM databases

iPTMnetiQ6AXP1
PhosphoSitePlusiQ6AXP1

Proteomic databases

PaxDbiQ6AXP1
PRIDEiQ6AXP1

Genome annotation databases

EnsembliENSRNOT00000030617; ENSRNOP00000032342; ENSRNOG00000023700
GeneIDi290615
KEGGirno:290615
UCSCiRGD:1311847, rat

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
290615
RGDi1311847, RGD1311847

Phylogenomic databases

eggNOGiENOG502RMHR, Eukaryota
GeneTreeiENSGT00390000002505
HOGENOMiCLU_028158_0_0_1
InParanoidiQ6AXP1
OMAiTRREMAV
OrthoDBi878530at2759
PhylomeDBiQ6AXP1
TreeFamiTF330762

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q6AXP1

Gene expression databases

BgeeiENSRNOG00000023700, Expressed in testis and 19 other tissues

Family and domain databases

InterProiView protein in InterPro
IPR040120, C19orf44-like
IPR027884, DUF4614
PANTHERiPTHR22409, PTHR22409, 1 hit
PfamiView protein in Pfam
PF15391, DUF4614, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCS044_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6AXP1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: September 13, 2004
Last modified: August 12, 2020
This is version 79 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome
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