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Protein

Rab9 effector protein with kelch motifs

Gene

rabepk

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Rab9 effector required for endosome to trans-Golgi network (TGN) transport.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Rab9 effector protein with kelch motifs
Gene namesi
Name:rabepk
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-1009619 rabepk

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002806211 – 366Rab9 effector protein with kelch motifsAdd BLAST366

Structurei

3D structure databases

ProteinModelPortaliQ6AXB2
SMRiQ6AXB2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati49 – 95Kelch 1Add BLAST47
Repeati100 – 146Kelch 2Add BLAST47
Repeati151 – 200Kelch 3Add BLAST50
Repeati204 – 253Kelch 4Add BLAST50
Repeati254 – 303Kelch 5Add BLAST50
Repeati343 – 366Kelch 6Add BLAST24

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

HOVERGENiHBG080504
KOiK20285

Family and domain databases

Gene3Di2.120.10.80, 2 hits
InterProiView protein in InterPro
IPR011043 Gal_Oxase/kelch_b-propeller
IPR015915 Kelch-typ_b-propeller
IPR006652 Kelch_1
PfamiView protein in Pfam
PF01344 Kelch_1, 1 hit
SUPFAMiSSF50965 SSF50965, 1 hit

Sequencei

Sequence statusi: Complete.

Q6AXB2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLLEVLDPE DLPKMSTWYA LVPRGEGPSA RVGHTCMYVS SSEDSSKGKI
60 70 80 90 100
LILGGADPSG CYSDTHIIDL DNHEWDNPDS EGLLPRYEHA SFISASNPGN
110 120 130 140 150
IWVFAGAEQA ENRNCVQVLN PGAASWKSPK VMGTPPSPRT FHTSSAAIED
160 170 180 190 200
KLYVFGGGEK GAEPVADTNL YIYDAATMTW TQPVTSGDPP QARHGHVLTA
210 220 230 240 250
LGTKLFVHGG MAGSTFFKDM FCIDTDTMKW ERLKTKGDLP PACAAHSSVA
260 270 280 290 300
WKSYIYIFGG MTSTGATNSM YRYNTETLLW KQLKFDSACP PARLDHSMCL
310 320 330 340 350
LPWKTRTNTD NAEKLPCKAK EESNLKECSS ATSKTLEQGI VHLCFIFGGM
360
DTDGELHSDC CVTILQ
Length:366
Mass (Da):39,923
Last modified:September 13, 2004 - v1
Checksum:i0129309874D86844
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079681 mRNA Translation: AAH79681.1
RefSeqiNP_001087370.1, NM_001093901.1
UniGeneiXl.33675

Genome annotation databases

GeneIDi447194
KEGGixla:447194

Similar proteinsi

Entry informationi

Entry nameiRABEK_XENLA
AccessioniPrimary (citable) accession number: Q6AXB2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: September 13, 2004
Last modified: May 23, 2018
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

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