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Protein

Ankyrin repeat-containing protein At5g02620

Gene

At5g02620

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Ankyrin repeat-containing protein At5g02620
Gene namesi
Ordered Locus Names:At5g02620
ORF Names:T22P11.210
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G02620
TAIRilocus:2181768 AT5G02620

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei349 – 369HelicalSequence analysisAdd BLAST21
Transmembranei399 – 419HelicalSequence analysisAdd BLAST21
Transmembranei441 – 461HelicalSequence analysisAdd BLAST21
Transmembranei472 – 492HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003120311 – 524Ankyrin repeat-containing protein At5g02620Add BLAST524

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei508PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ6AWW5

PTM databases

iPTMnetiQ6AWW5

Expressioni

Gene expression databases

ExpressionAtlasiQ6AWW5 baseline and differential
GenevisibleiQ6AWW5 AT

Interactioni

Protein-protein interaction databases

BioGridi17131, 32 interactors
IntActiQ6AWW5, 32 interactors
STRINGi3702.AT5G02620.1

Structurei

3D structure databases

ProteinModelPortaliQ6AWW5
SMRiQ6AWW5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati16 – 45ANK 1Add BLAST30
Repeati55 – 84ANK 2Add BLAST30
Repeati90 – 119ANK 3Add BLAST30
Repeati124 – 153ANK 4Add BLAST30
Repeati158 – 187ANK 5Add BLAST30
Repeati192 – 222ANK 6Add BLAST31
Repeati226 – 255ANK 7Add BLAST30
Repeati260 – 289ANK 8Add BLAST30

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi416 – 419Poly-Val4

Keywords - Domaini

ANK repeat, Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0504 Eukaryota
COG0666 LUCA
HOGENOMiHOG000234376
InParanoidiQ6AWW5
OMAiDLVDHKH
OrthoDBiEOG0936068H
PhylomeDBiQ6AWW5

Family and domain databases

CDDicd00204 ANK, 3 hits
Gene3Di1.25.40.20, 3 hits
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR027002 At2g01680/At5g02620
IPR026961 PGG_dom
PANTHERiPTHR24186:SF10 PTHR24186:SF10, 1 hit
PfamiView protein in Pfam
PF00023 Ank, 1 hit
PF12796 Ank_2, 3 hits
PF13962 PGG, 1 hit
SMARTiView protein in SMART
SM00248 ANK, 8 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 6 hits

Sequencei

Sequence statusi: Complete.

Q6AWW5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKEIKKTMTK QMTARRDDTP LHTAVREGKT DLLLEMIGEH DGVELKELLA
60 70 80 90 100
EQNQSGETAL YVAAEYGYTD MVKILMKHSD SVLAGTKAKN GFDAFHIAAK
110 120 130 140 150
NGNLQVLDVL IEANPELSFT FDSSKTTALH TAASQGHGEI VCFLLDKGVD
160 170 180 190 200
LAAIARSNGK TALHSAARNG HTVIVKKLIE KKAGMVTRVD KKGQTALHMA
210 220 230 240 250
VKGQNTEIVD VLMEADGSLI NSADNKGNTP LHIAVRKNRA EIVQTVLKYC
260 270 280 290 300
EVSRVAVNKS GETALDIAEK TGLHEIVPLL QKIGMQNARS IKPAEKVEPS
310 320 330 340 350
GSSRKLKETV SEIGHEVHTQ LEQTGRTRRE IQGIAKRVNK MHTEGLNNAI
360 370 380 390 400
NSTTLVAILI ATVAFAAIFN VPGQYTDDPK DVPPGYSLGE ARAAPRPEFL
410 420 430 440 450
IFVVFDSFAL FISLAVVVVQ TSVVVIERRA KKQMMAIINK LMWMACIMIS
460 470 480 490 500
VAFVSLSFVV VGEKEKPLAV GVTAIGALIM VSTLGTMCYW VIANRIEGSK
510 520
SSPASMMSDP ELADSKHNRK LYAV
Length:524
Mass (Da):56,923
Last modified:September 13, 2004 - v1
Checksum:iBEA7DD72B8609FE4
GO

Sequence cautioni

The sequence CAB85999 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti417V → D in BAE98405 (Ref. 4) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL162971 Genomic DNA Translation: CAB85999.1 Different initiation.
CP002688 Genomic DNA Translation: AED90499.1
CP002688 Genomic DNA Translation: ANM70363.1
CP002688 Genomic DNA Translation: ANM70366.1
BT015133 mRNA Translation: AAT85729.1
BT020220 mRNA Translation: AAV59286.1
AK226242 mRNA Translation: BAE98405.1
PIRiT48283
RefSeqiNP_001331980.1, NM_001342663.1
NP_001331983.1, NM_001342662.1
NP_195882.2, NM_120340.4
UniGeneiAt.33394

Genome annotation databases

EnsemblPlantsiAT5G02620.1; AT5G02620.1; AT5G02620
AT5G02620.3; AT5G02620.3; AT5G02620
AT5G02620.4; AT5G02620.4; AT5G02620
GeneIDi831855
GrameneiAT5G02620.1; AT5G02620.1; AT5G02620
AT5G02620.3; AT5G02620.3; AT5G02620
AT5G02620.4; AT5G02620.4; AT5G02620
KEGGiath:AT5G02620

Similar proteinsi

Entry informationi

Entry nameiY5262_ARATH
AccessioniPrimary (citable) accession number: Q6AWW5
Secondary accession number(s): Q0WWU3, Q9LZ40
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: September 13, 2004
Last modified: July 18, 2018
This is version 100 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names

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