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Protein

Cingulin-like protein 1

Gene

Cgnl1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May be involved in anchoring the apical junctional complex, especially tight junctions, to actin-based cytoskeletons.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Cingulin-like protein 1
Alternative name(s):
Junction-associated coiled-coil protein
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Cgnl1
Synonyms:Jacop, Kiaa1749
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unplaced

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1915428 Cgnl1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cell junction, Tight junction

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003128761 – 1298Cingulin-like protein 1Add BLAST1298

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei113PhosphoserineBy similarity1
Modified residuei203PhosphoserineCombined sources1
Modified residuei257PhosphoserineCombined sources1
Modified residuei284PhosphoserineCombined sources1
Modified residuei298PhosphoserineCombined sources1
Modified residuei299PhosphoserineBy similarity1
Modified residuei389PhosphoserineBy similarity1
Modified residuei392PhosphoserineBy similarity1
Modified residuei483PhosphoserineBy similarity1
Modified residuei679PhosphoserineCombined sources1
Modified residuei705PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q6AW69

PeptideAtlas

More...
PeptideAtlasi
Q6AW69

PRoteomics IDEntifications database

More...
PRIDEi
Q6AW69

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q6AW69

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q6AW69

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Widely expressed. Highly expressed in the kidney and lung.1 Publication

Gene expression databases

CleanEx database of gene expression profiles

More...
CleanExi
MM_CGNL1

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer or oligomer (Probable). Interacts with CD2AP and SH3BP1; probably part of a complex at cell junctions (By similarity).By similarity1 Publication

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
212704, 1 interactor

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000072672

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
Q6AW69

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q6AW69

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 551HeadAdd BLAST551
Regioni1260 – 1298TailAdd BLAST39

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili605 – 1252Sequence analysisAdd BLAST648

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi37 – 51ZIMBy similarityAdd BLAST15

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi297 – 301Poly-Ser5
Compositional biasi1265 – 1271Poly-Asp7

<p>This subsection of the ‘Family and domains’ section provides general information on the biological role of a domain. The term ‘domain’ is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

The head region is responsible for both junction and actin filament-based distribution.1 Publication

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the cingulin family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IGSJ Eukaryota
ENOG410YEC7 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000060190

The HOVERGEN Database of Homologous Vertebrate Genes

More...
HOVERGENi
HBG107670

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q6AW69

KEGG Orthology (KO)

More...
KOi
K21110

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q6AW69

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002928 Myosin_tail

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01576 Myosin_tail_1, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (5+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 5 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 5 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q6AW69-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MELYFGEYQH VQQEYGVHLR LASGDTPKPR NSQPSKAGSY GVSIRVQGID
60 70 80 90 100
GHPYIVLNNT ERCLAGTPFP ENAPSFPSSV INNLSLHPSN GTVLKENTPE
110 120 130 140 150
ELQLPENPYL QTSPLRGQKQ FSLHEGRNGV LERKDGPTKL PHVLNFQRHP
160 170 180 190 200
ELLQPYDPEK NEVNAKKHHP PESPWLRNAT EDGTNCKKSR NCFPKSYGSQ
210 220 230 240 250
PNSPTSEDLA KTNMTAIRLC SSVVIEDPQK QTSVCVNVQR CAKEGVGEET
260 270 280 290 300
LSPRRKSPTA PSPQAYSETK KNRPDVLPFR RQDSAGPILD GARSRRSSSS
310 320 330 340 350
STTPTSATSL YKFLLDDQEC AIHADSVNRH ENRRYIPFLP GTGRDIDTCS
360 370 380 390 400
IPGVDQLIEK FDQKPGLQRR GRSGKRNRIN PDDRKRSRSV DSAFPFGLQG
410 420 430 440 450
NTEYLTEFSR NLGKSSEHLL RPSQVFPQRS VAQEHRGKHS PSSPPAKLQG
460 470 480 490 500
GAQGAHPKPP LQNKDGKVLN KGRQESTGAC APSLPAPNKK EEEIKIATAT
510 520 530 540 550
LMLQNRAVAA TSDSGAKKIS VKTFPSDSST QATPDLLKGQ QELTQQTNEE
560 570 580 590 600
TAKQILYNYL KEGGTDNEDA TKRKVNLVFE KIQTLKSRAA GSAQGSNQAP
610 620 630 640 650
NSPSEGNSLL DQKNKLILEV SELQQQLQLE MKNQQNIKEE RERMREDLEE
660 670 680 690 700
LRVRHQSQVE ETATLQRRLE ESEGELRKSL EELFQVKMER EQHQTEIRDL
710 720 730 740 750
QDQLSEMHDE LDSTKRSEDR EKGALIEELL QAKQDLQDLL IAKEEQEDLL
760 770 780 790 800
RKRERELTAL KGALKEEVSS HDQEMDKLKE QYDAELQAFR ESVEEATKNV
810 820 830 840 850
EVLASRSNSS EQSQAEADLR EKVLKEENEK LQGRIAELER RAAQLQRQME
860 870 880 890 900
DVKGDEAQAK ETLRKCESEV QQLEEALVHA RKEEKEATCA RRALEKELEQ
910 920 930 940 950
AQRELSQVSQ EQKELLEKLR DEAEQKEQLR KLKNEMESER WHLDKTIQKL
960 970 980 990 1000
QKEMADIAEA SRTSSLELQK QLGEYKEKNR RELAEMQTQL KEKCLEVEKA
1010 1020 1030 1040 1050
RLAASKMQDE LRLKEEELQD YQRAEEEALT KRQLLEQSLK DLEYELEAKS
1060 1070 1080 1090 1100
HLKDDRSRLI KQMEDKVSQL EIELEEERTN ADLLSERITW SREQMEQMRS
1110 1120 1130 1140 1150
ELLQEKAAKQ DLECDKISLE RQNKDLKSRI IHLEGSYRSS KEGLVVQMEA
1160 1170 1180 1190 1200
RIAELEDRLE NEERDRANLQ LSNRRLERKV KELVMQVDDE HLSLTDQKDQ
1210 1220 1230 1240 1250
LSLRLKAMKR QVEEAEEEID RLESSKKKLQ RELEEQMGVN EQLQGQLNSL
1260 1270 1280 1290
KKGLRLKTLS SKVLDDSDDD DLSSDAGSLY EAPLSYAFPK DSTIASQI
Length:1,298
Mass (Da):148,231
Last modified:December 4, 2007 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i535EDD1B752B3752
GO
Isoform 2 (identifier: Q6AW69-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1184: Missing.

Show »
Length:114
Mass (Da):12,912
Checksum:i46BE1873E5B9F2C8
GO
Isoform 3 (identifier: Q6AW69-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     450-450: Missing.
     728-798: Missing.

Show »
Length:1,226
Mass (Da):139,862
Checksum:i145791C242113AE7
GO
Isoform 4 (identifier: Q6AW69-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     450-450: Missing.

Show »
Length:1,297
Mass (Da):148,174
Checksum:iCF9D04DA81A38392
GO
Isoform 5 (identifier: Q6AW69-5) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     450-450: Missing.
     633-635: Missing.

Show »
Length:1,294
Mass (Da):147,803
Checksum:iAC576CA761302A07
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
B2RSU6B2RSU6_MOUSE
Cingulin-like 1
Cgnl1
1,297Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
D3Z3H4D3Z3H4_MOUSE
Cingulin-like protein 1
Cgnl1
1,226Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti464K → I in BAC29612 (PubMed:16141072).Curated1
Sequence conflicti529S → G in BAD34967 (PubMed:15292197).Curated1
Sequence conflicti902Q → R in BAD32530 (PubMed:15368895).Curated1
Sequence conflicti948Q → E in BAD32530 (PubMed:15368895).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting. The information stored in this subsection is used to automatically construct alternative protein sequence(s) for display.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0299471 – 1184Missing in isoform 2. 2 PublicationsAdd BLAST1184
Alternative sequenceiVSP_029948450Missing in isoform 3, isoform 4 and isoform 5. 2 Publications1
Alternative sequenceiVSP_029949633 – 635Missing in isoform 5. 1 Publication3
Alternative sequenceiVSP_029950728 – 798Missing in isoform 3. 1 PublicationAdd BLAST71

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB186125 mRNA Translation: BAD34967.1
AK018850 mRNA Translation: BAB31463.1
AK036871 mRNA Translation: BAC29612.1
AK040774 mRNA Translation: BAC30701.2
BC031499 mRNA Translation: AAH31499.1
BC039211 mRNA Translation: AAH39211.1
AK173252 mRNA Translation: BAD32530.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS23328.1 [Q6AW69-4]

NCBI Reference Sequences

More...
RefSeqi
NP_001291291.1, NM_001304362.1
NP_080875.3, NM_026599.5

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Mm.99961

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
68178

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:68178

UCSC genome browser

More...
UCSCi
uc009qpb.2 mouse [Q6AW69-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB186125 mRNA Translation: BAD34967.1
AK018850 mRNA Translation: BAB31463.1
AK036871 mRNA Translation: BAC29612.1
AK040774 mRNA Translation: BAC30701.2
BC031499 mRNA Translation: AAH31499.1
BC039211 mRNA Translation: AAH39211.1
AK173252 mRNA Translation: BAD32530.1
CCDSiCCDS23328.1 [Q6AW69-4]
RefSeqiNP_001291291.1, NM_001304362.1
NP_080875.3, NM_026599.5
UniGeneiMm.99961

3D structure databases

ProteinModelPortaliQ6AW69
SMRiQ6AW69
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi212704, 1 interactor
STRINGi10090.ENSMUSP00000072672

PTM databases

iPTMnetiQ6AW69
PhosphoSitePlusiQ6AW69

Proteomic databases

PaxDbiQ6AW69
PeptideAtlasiQ6AW69
PRIDEiQ6AW69

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi68178
KEGGimmu:68178
UCSCiuc009qpb.2 mouse [Q6AW69-2]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
84952
MGIiMGI:1915428 Cgnl1

Rodent Unidentified Gene-Encoded large proteins database

More...
Rougei
Search...

Phylogenomic databases

eggNOGiENOG410IGSJ Eukaryota
ENOG410YEC7 LUCA
HOGENOMiHOG000060190
HOVERGENiHBG107670
InParanoidiQ6AW69
KOiK21110
PhylomeDBiQ6AW69

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Cgnl1 mouse

Protein Ontology

More...
PROi
PR:Q6AW69

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

CleanExiMM_CGNL1

Family and domain databases

InterProiView protein in InterPro
IPR002928 Myosin_tail
PfamiView protein in Pfam
PF01576 Myosin_tail_1, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCGNL1_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q6AW69
Secondary accession number(s): Q5U5U0
, Q69ZB4, Q8BLZ5, Q8BZ26, Q9D2T3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: December 4, 2007
Last modified: October 25, 2017
This is version 86 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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