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Protein
Submitted name:

Os05g0500600 protein

Gene

Os05g0500600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Os05g0500600 proteinImported
Submitted name:
cDNA clone:J023050L12, full insert sequenceImported
Gene namesi
Name:Os05g0500600Imported
Ordered Locus Names:Os05g0500600Imported
ORF Names:OJ1057_B02.15Imported, OSJNBa0017K09.1Imported, OSNPB_050500600Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiQ6AUW2 differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 423GRASInterPro annotationAdd BLAST397

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni203 – 235Leucine repeat II (LRII)PROSITE-ProRule annotationAdd BLAST33
Regioni351 – 423SAWPROSITE-ProRule annotationAdd BLAST73

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi152 – 156VHIIDPROSITE-ProRule annotation5

Sequence similaritiesi

Belongs to the GRAS family.PROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410III6 Eukaryota
ENOG410XRRT LUCA
OMAiDLSVTHC
OrthoDBiEOG093609JO

Family and domain databases

InterProiView protein in InterPro
IPR005202 TF_GRAS
PfamiView protein in Pfam
PF03514 GRAS, 1 hit
PROSITEiView protein in PROSITE
PS50985 GRAS, 1 hit

Sequencei

Sequence statusi: Complete.

Q6AUW2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDMEHELRGG GVGAAAHGHG SICFSGGPVL VDGRRIQQLL LHCAAALESN
60 70 80 90 100
DVTLAQQAMW VLNNIASSQG DPSQRLTSWL LRALVARACR LCAAAPAGAA
110 120 130 140 150
VEFLERGRAP PWGRAMSVTE LADYVDLTPW HRFGFTASNA AILRAVAGAS
160 170 180 190 200
AVHVVDLSVT HCMQWPTLID VLSKRPGGAP AIRITVPSVR PAVPPLLAVS
210 220 230 240 250
SSELGARLAI FAKSKGVQLE FNVVESATTT SPKKTSTTLC QELASVLSDP
260 270 280 290 300
PSLGLRDGEA VVVNCQSWLR HVAPDTRDLF LDTVRALNPC LLTVTDEDAD
310 320 330 340 350
LGSPSLASRM AGCFDFHWIL LDALDMSAPK DSPRRLEQEA AVGRKIESVI
360 370 380 390 400
GEEDGAERSE PGARLAERMS RKGFAGVVFD EEAAAEVRRL LSEHATGWGV
410 420
KREDDMLVLT WKGHAAVFTG AWTPN
Length:425
Mass (Da):45,431
Last modified:September 13, 2004 - v1
Checksum:i31D68B7E0669E044
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC113332 Genomic DNA Translation: AAT93866.1
AC130597 Genomic DNA Translation: AAU90224.1
AP008211 Genomic DNA Translation: BAF17879.1
AK070489 mRNA Translation: BAG91983.1
AP014961 Genomic DNA Translation: BAS94759.1
RefSeqiXP_015638716.1, XM_015783230.1
UniGeneiOs.53020

Genome annotation databases

EnsemblPlantsiOs05t0500600-01; Os05t0500600-01; Os05g0500600
GeneIDi4339232
GrameneiOs05t0500600-01; Os05t0500600-01; Os05g0500600
KEGGiosa:4339232

Similar proteinsi

Entry informationi

Entry nameiQ6AUW2_ORYSJ
AccessioniPrimary (citable) accession number: Q6AUW2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: May 23, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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