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Protein
Submitted name:

Related to methyl-accepting chemotaxis protein

Gene

DP0979

Organism
Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciDPSY177439:G1GHX-985-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Related to methyl-accepting chemotaxis proteinImported
Gene namesi
Ordered Locus Names:DP0979Imported
OrganismiDesulfotalea psychrophila (strain LSv54 / DSM 12343)Imported
Taxonomic identifieri177439 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea
Proteomesi
  • UP000000602 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 34HelicalSequence analysisAdd BLAST23
Transmembranei320 – 338HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi177439.DP0979

Structurei

3D structure databases

ProteinModelPortaliQ6APL6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini339 – 391HAMPInterPro annotationAdd BLAST53
Domaini403 – 646Methyl-accepting transducerInterPro annotationAdd BLAST244
Domaini569 – 631T-SNARE coiled-coil homologyInterPro annotationAdd BLAST63

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107YS4 Bacteria
COG0840 LUCA
HOGENOMiHOG000102825
KOiK03406
OMAiKWGDTGY
OrthoDBiPOG091H0QRR

Family and domain databases

CDDicd06225 HAMP, 1 hit
InterProiView protein in InterPro
IPR033462 Cache_3-Cache_2
IPR004090 Chemotax_Me-accpt_rcpt
IPR003660 HAMP_dom
IPR004089 MCPsignal_dom
IPR029151 Sensor-like_sf
IPR000727 T_SNARE_dom
PfamiView protein in Pfam
PF17201 Cache_3-Cache_2, 1 hit
PF00015 MCPsignal, 1 hit
PRINTSiPR00260 CHEMTRNSDUCR
SMARTiView protein in SMART
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
SUPFAMiSSF103190 SSF103190, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit
PS50192 T_SNARE, 1 hit

Sequencei

Sequence statusi: Complete.

Q6APL6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTKLKNVQF TTKLFCATVC IAVLCVIVIT GVALNMASES LREFGKQAIT
60 70 80 90 100
DVHDTVRSSL LMYNKNTQAT LGENIRVFKQ EFSTKGELVL DRTNMRDQTL
110 120 130 140 150
INQVTGQQRR QKIPQLQLGD TILNGDTGYI DSVAHLLGAS ATIFQLVDDK
160 170 180 190 200
LLRVATTVKK ANGQRAVGTY IPSDSAVCRS ILAGNTFRGR AFVVSDWYLT
210 220 230 240 250
VYTPLYDKAG KLVGAIYVGR KMLNEQVADF IRNTHVDSGY FFVYSEDGKV
260 270 280 290 300
LVHPNRSYEN IEVLPVFRGV RDDDLVYEFN GTTRFAKVAY IEEWGVSLAV
310 320 330 340 350
SLEEEAITGG FVRSMVSTNI IVGFLVVLAS IIVSIFLVRS INAPLKELAA
360 370 380 390 400
KAVQVGEGDY TVDFQSENRD AIGQLTNALG MMVSKSRDVL GNIINSSQTL
410 420 430 440 450
HVSSGQLSGI SEEMLTAADT TTKIADEAMT NAEGTSENIN SISAAIEQSA
460 470 480 490 500
TNLDMIASAA EEMGSTIKEI AENSSRARFT TETAVETARK SQAGVQALGE
510 520 530 540 550
AARSIGTVTE TITEISEQTN LLALNATIEA ARAGEAGKGF AVVANEIKEL
560 570 580 590 600
ARETAQATEK IRTAITGIQK QTGEAVADID GISQVINEVN EIVSTIVAAV
610 620 630 640 650
EEQAVTTNEI AANVSQASVG INEINENVAN SSSMTHLVSE GVVSVRGRSL
660 670 680
EVKENSQRVN VSATDLSHLA EKLTELVSRF RIS
Length:683
Mass (Da):73,685
Last modified:September 13, 2004 - v1
Checksum:i648A61A2EAB8349D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA Translation: CAG35708.1
RefSeqiWP_011188222.1, NC_006138.1

Genome annotation databases

EnsemblBacteriaiCAG35708; CAG35708; DP0979
KEGGidps:DP0979

Similar proteinsi

Entry informationi

Entry nameiQ6APL6_DESPS
AccessioniPrimary (citable) accession number: Q6APL6
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: June 20, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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