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Protein

Major capsid protein

Gene

FV3-090R

Organism
Frog virus 3 (isolate Goorha) (FV-3)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Major capsid protein that self assembles to form a T=133 or T=147 icosahedral capsid.1 Publication

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Major capsid protein
Short name:
MCP
Alternative name(s):
P50
Gene namesi
ORF Names:FV3-090R
OrganismiFrog virus 3 (isolate Goorha) (FV-3)
Taxonomic identifieri654924 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeAlphairidovirinaeRanavirus
Virus hostiAmbystoma (mole salamanders) [TaxID: 8295]
Dryophytes versicolor (chameleon treefrog) [TaxID: 30343]
Lithobates pipiens (Northern leopard frog) (Rana pipiens) [TaxID: 8404]
Notophthalmus viridescens (Eastern newt) (Triturus viridescens) [TaxID: 8316]
Rana sylvatica (Wood frog) [TaxID: 45438]
Proteomesi
  • UP000008770 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002223791 – 463Major capsid proteinAdd BLAST463

Proteomic databases

PRIDEiQ67473

Expressioni

Keywords - Developmental stagei

Late protein

Interactioni

Subunit structurei

Homomultimer.

Structurei

3D structure databases

ProteinModelPortaliQ67473
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi425 – 428Poly-Gly4

Sequence similaritiesi

Belongs to the NCLDV major capsid protein family.Curated

Phylogenomic databases

OrthoDBiVOG090000JY

Family and domain databases

Gene3Di2.70.9.10, 1 hit
2.70.9.20, 1 hit
InterProiView protein in InterPro
IPR031654 Capsid_N
IPR016111 Hexon_subdom4
IPR007542 MCP_C
IPR038519 MCP_C_sf
IPR016112 VP_dsDNA_II
PfamiView protein in Pfam
PF16903 Capsid_N, 1 hit
PF04451 Capsid_NCLDV, 1 hit
SUPFAMiSSF49749 SSF49749, 2 hits

Sequencei

Sequence statusi: Complete.

Q67473-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSVTGSGIT SGFIDLATYD NLERAMYGGS DATTYFVKEH YPVGWFTKLP
60 70 80 90 100
SLAAKMSGNP AFGQQFSVGV PRSGDYILNA WLVLKTPEVE LLAANQLGDN
110 120 130 140 150
GTIRWTKNPM HNIVESVTLS FNDISAQSFN TAYLDAWSEY TMPEAKRTGY
160 170 180 190 200
YNMIGNTSDL INPAPATGQD GARVLPAKNL VLPLPFFFSR DSGLALPVVS
210 220 230 240 250
LPYNEIRITV KLRAIHDLLI LQHNTTGAIS PIVASDLAGG LPDTVEANVY
260 270 280 290 300
MTVALITGDE RQAMSSTVRD MVVEQVQAAP VHMVNPRNAT TFHTDMRFSH
310 320 330 340 350
AVKALMFMVQ NVTHPSVGSN YTCVTPVVGV GNTVLEPALA VDPVKSASLV
360 370 380 390 400
YENTTRLPDM GVEYYSLVEP WYYATSIPVS TGHHLYSYAL SLQDPHPSGS
410 420 430 440 450
TNYGRLTNAS LNVTLSAEAT TAAAGGGGNN SGYTTAQKYA LIVLAINHNI
460
IRIMNGSMGF PIL
Length:463
Mass (Da):49,917
Last modified:November 1, 1996 - v1
Checksum:iE20D6EFF1A48AD2A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U36913 Genomic DNA Translation: AAB01722.1
AY548484 Genomic DNA Translation: AAT09750.1
RefSeqiYP_031669.1, NC_005946.1

Genome annotation databases

GeneIDi2947809
KEGGivg:2947809

Entry informationi

Entry nameiMCP_FRG3G
AccessioniPrimary (citable) accession number: Q67473
Secondary accession number(s): Q6GZN5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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