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Protein
Submitted name:

Map1lc3a protein

Gene

map1lc3a

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Keywordsi

Biological processAutophagyUniRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-XTR-1632852 Macroautophagy
R-XTR-5205685 Pink/Parkin Mediated Mitophagy
R-XTR-8934903 Receptor Mediated Mitophagy

Names & Taxonomyi

Protein namesi
Submitted name:
Map1lc3a proteinImported
Submitted name:
Microtubule-associated protein 1 light chain 3 alphaImported
Gene namesi
Name:map1lc3aImported
ORF Names:TEgg034p18.1-001Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-941851 map1lc3a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi120Phosphatidylethanolamine amidated glycineUniRule annotation1

Keywords - PTMi

LipoproteinUniRule annotation

Expressioni

Gene expression databases

BgeeiENSXETG00000019473 Expressed in 11 organ(s), highest expression level in heart

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000042188

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1654 Eukaryota
ENOG4111JAT LUCA
GeneTreeiENSGT00390000012937
HOGENOMiHOG000232034
HOVERGENiHBG051706
KOiK10435
OMAiHFIFILH
OrthoDBiEOG091G18ST
TreeFamiTF312964

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit

Sequencei

Sequence statusi: Complete.

Q66KA4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPSERPFKHR RTFAERCAEV RQIREQHPNK IPVIIERYKG EKQLPVLDKT
60 70 80 90 100
KFLVPDHVNM SELVKIIRRR LQLNPTQAFF LLVNQHSMVS VSTPILDIYE
110 120
QEKDEDGFLY MVYASQETFG H
Length:121
Mass (Da):14,368
Last modified:October 11, 2004 - v1
Checksum:i3D82E6CA8EF6803D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01016812 Genomic DNA No translation available.
AAMC01016813 Genomic DNA No translation available.
AAMC01016814 Genomic DNA No translation available.
AAMC01016815 Genomic DNA No translation available.
BC080488 mRNA Translation: AAH80488.1
CR761386 mRNA Translation: CAJ82305.1
RefSeqiNP_001007979.1, NM_001007978.2
UniGeneiStr.13107

Genome annotation databases

EnsembliENSXETT00000042188; ENSXETP00000042188; ENSXETG00000019473
GeneIDi493344
KEGGixtr:493344

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01016812 Genomic DNA No translation available.
AAMC01016813 Genomic DNA No translation available.
AAMC01016814 Genomic DNA No translation available.
AAMC01016815 Genomic DNA No translation available.
BC080488 mRNA Translation: AAH80488.1
CR761386 mRNA Translation: CAJ82305.1
RefSeqiNP_001007979.1, NM_001007978.2
UniGeneiStr.13107

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000042188

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000042188; ENSXETP00000042188; ENSXETG00000019473
GeneIDi493344
KEGGixtr:493344

Organism-specific databases

CTDi84557
XenbaseiXB-GENE-941851 map1lc3a

Phylogenomic databases

eggNOGiKOG1654 Eukaryota
ENOG4111JAT LUCA
GeneTreeiENSGT00390000012937
HOGENOMiHOG000232034
HOVERGENiHBG051706
KOiK10435
OMAiHFIFILH
OrthoDBiEOG091G18ST
TreeFamiTF312964

Enzyme and pathway databases

ReactomeiR-XTR-1632852 Macroautophagy
R-XTR-5205685 Pink/Parkin Mediated Mitophagy
R-XTR-8934903 Receptor Mediated Mitophagy

Gene expression databases

BgeeiENSXETG00000019473 Expressed in 11 organ(s), highest expression level in heart

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ66KA4_XENTR
AccessioniPrimary (citable) accession number: Q66KA4
Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: September 12, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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