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Protein

Gag polyprotein

Gene

GAG

Organism
Feline immunodeficiency virus
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processHost-virus interaction, Viral budding, Viral budding via the host ESCRT complexesSAAS annotation, Viral release from host cell
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Gag polyproteinSAAS annotation
Gene namesi
Name:GAGImported
OrganismiFeline immunodeficiency virusImported
Taxonomic identifieri11673 [NCBI]
Taxonomic lineageiVirusesOrterviralesRetroviridaeOrthoretrovirinaeLentivirus

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

Structurei

3D structure databases

ProteinModelPortaliQ66963
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini377 – 392CCHC-typeInterPro annotationAdd BLAST16
Domaini395 – 409CCHC-typeInterPro annotationAdd BLAST15

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerSAAS annotation

Family and domain databases

Gene3Di1.10.1200.30, 1 hit
1.10.150.90, 1 hit
1.10.375.10, 1 hit
InterProiView protein in InterPro
IPR000721 Gag_p24
IPR012344 Matrix_HIV/RSV_N
IPR008916 Retrov_capsid_C
IPR008919 Retrov_capsid_N
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00607 Gag_p24, 1 hit
PF00098 zf-CCHC, 2 hits
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 2 hits
SUPFAMiSSF47943 SSF47943, 1 hit
SSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 2 hits

Sequencei

Sequence statusi: Complete.

Q66963-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNGQGRDWK MAIKRCSNVA VGVGGKSKKF GEGNFRWAIR MANVSTGREP
60 70 80 90 100
GDIPETLDQL RLVICDLQER REKFGSSKEI DMAITTLKVF AVVGLLNMTV
110 120 130 140 150
STAAAAENMY TQMGLDTRPS TKEAGGKEEG PPQAYPIQTV NGAPQYVALD
160 170 180 190 200
PKMVSIFMEK AREGLGGEEV QLWFTAFSAN LTLTDMATLI MAAPGCAADK
210 220 230 240 250
EILDESLKQL TAEYDRTHPP DGPRPLPYFT AAEIMGIGLT QEQQAEPRFA
260 270 280 290 300
PARMQCRAWY LEALGKLAAI KAKSPRAVQL RQGAKEDYSS FIDRLFAQID
310 320 330 340 350
QEQNTAEVKL YLKQSLNIAN ANADCKKAMS HLKPESTLEE KLRACQEIGS
360 370 380 390 400
PGYKMQLLAE ALTKVQVVQS KGSGPVCFNC KKPGHLARQC RDVKKCNKCG
410 420 430 440 450
KPGHLAARCW QGGKMNSGNW KAGRAAAPVN QVQQAVMPSA PPVEEKLLDL
Length:450
Mass (Da):49,153
Last modified:November 1, 1996 - v1
Checksum:iD9AF2FE37496DF09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X68019 Genomic DNA Translation: CAA48157.1
PIRiS25162

Similar proteinsi

Entry informationi

Entry nameiQ66963_9RETR
AccessioniPrimary (citable) accession number: Q66963
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 18, 2018
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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