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Entry version 72 (26 Feb 2020)
Sequence version 1 (11 Oct 2004)
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Protein
Submitted name:

Uncharacterized protein

Gene

YPTB2659

Organism
Yersinia pseudotuberculosis serotype I (strain IP32953)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
YPSE273123:GI1M-2711-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:YPTB2659Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiYersinia pseudotuberculosis serotype I (strain IP32953)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri273123 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001011 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni720 – 970DisorderedSequence analysisAdd BLAST251

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi720 – 865Pro-richSequence analysisAdd BLAST146
Compositional biasi872 – 964BasicSequence analysisAdd BLAST93

Phylogenomic databases

KEGG Orthology (KO)

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KOi
K11904

Identification of Orthologs from Complete Genome Data

More...
OMAi
MSRTINL

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.40.50.230, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR017847 T6SS_RhsGE_Vgr_subset
IPR006533 T6SS_Vgr_RhsGE
IPR037026 Vgr_OB-fold_dom_sf

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01646 vgr_GE, 1 hit
TIGR03361 VI_Rhs_Vgr, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q668S8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSRTINLSSP AMPYLLGEPA LVLSKLEGEE AFSTLYSYTI TAKTPANPLI
60 70 80 90 100
PWQAASNVDL KSLIGKEMTI EMELDGNGLG DVRSVGKGTR EITGLVERAR
110 120 130 140 150
YIGRDANQAI FEITIKPWFY LANLTSDFKI YQNKNVVDII EEVFSDYNFP
160 170 180 190 200
FEKRLATTYP ILDFQVQYGE TDFNFLQRLM EEWGIYWFFE HQDHKQKLIL
210 220 230 240 250
VDHVGAHKRS FSTAYHAIEY LSDEPKAGEE YITQFQTQET LTSGTWVTND
260 270 280 290 300
YDFTKSRADI LAMDSKPRKT SFNDLEIYHW PGDYDQPDIG EHLSRVRIEE
310 320 330 340 350
RGALGSRAVG SGQLRGIVCG ANFELKGFPV DKANREYMII SSRLTVAEVD
360 370 380 390 400
QLSGGEDAFS CESSFTVQPT TKIYRHPQVT PKPKTNGPQN AIIVGPPGEE
410 420 430 440 450
IWTDEYGRVK VRFVWDRYGT NSESDSCWLR VSQAWAGNSF GGIYIPRIGQ
460 470 480 490 500
EVIVDCINGD PDRPMVMGSL YNNVTRPPWD LPANATQSGM VSRTVGGGLT
510 520 530 540 550
NYNGVRFEDK SGLEQYWEQA ERDMSRLTKN NETQIIGADS VLNVGANRSE
560 570 580 590 600
VVGANYNQDV LGTSMLAIGA ASMLQVGLAR SVVVGGAHSL NVVLANATNV
610 620 630 640 650
GGANMTNVGG FNGLAVGGAH QTAVGGAATL AAGGPIAIGA GGELILSGDI
660 670 680 690 700
VKIVGKSKVI IQGGEVHINS DDCCGRKTGN GGGAFGAFAS LAGLLPLAGA
710 720 730 740 750
IALPLPLPLL PIVVPPVTSP PDPTVPPDPT LPPDPTLPPD PTLPPETTAP
760 770 780 790 800
PETTAPPETT APPETTAPPE TTAPPETTAP PETTAPPETT APPETTAPPE
810 820 830 840 850
TTAPPETTAP PETTAPPETT APPETTAPPE TTAPPETTAP PETTAPPETT
860 870 880 890 900
APPETTAPPE TTAPPETTAP RRKQRHRQKQ RHRQKQRHRQ KQRHRQRQRH
910 920 930 940 950
RRKQRHRQRQ RHRQRQRHRR KQRHRRKQRH RRKPRHRQRQ RHRQRQRHRR
960 970
NRREHRQGRR RHRLDFIDKR
Length:970
Mass (Da):107,276
Last modified:October 11, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i11C281695D9F61F2
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
BX936398 Genomic DNA Translation: CAH21897.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
CAH21897; CAH21897; YPTB2659

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
yps:YPTB2659

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX936398 Genomic DNA Translation: CAH21897.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiCAH21897; CAH21897; YPTB2659
KEGGiyps:YPTB2659

Phylogenomic databases

KOiK11904
OMAiMSRTINL

Enzyme and pathway databases

BioCyciYPSE273123:GI1M-2711-MONOMER

Family and domain databases

Gene3Di2.40.50.230, 1 hit
InterProiView protein in InterPro
IPR017847 T6SS_RhsGE_Vgr_subset
IPR006533 T6SS_Vgr_RhsGE
IPR037026 Vgr_OB-fold_dom_sf
TIGRFAMsiTIGR01646 vgr_GE, 1 hit
TIGR03361 VI_Rhs_Vgr, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ668S8_YERPS
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q668S8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: February 26, 2020
This is version 72 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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