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UniProtKB - Q64FP0 (RDRP_WCCVB)
Protein
RNA-directed RNA polymerase
Gene
N/A
Organism
White clover cryptic virus 1 (isolate Boccardo/2004) (WCCV-1)
Status
Functioni
RNA-dependent RNA polymerase which replicates the viral genome.
CuratedCatalytic activityi
- EC:2.7.7.48
GO - Molecular functioni
- nucleotide binding Source: UniProtKB-KW
- RNA binding Source: InterPro
- RNA-directed 5'-3' RNA polymerase activity Source: UniProtKB-KW
GO - Biological processi
- transcription, DNA-templated Source: InterPro
Keywordsi
Molecular function | Nucleotidyltransferase, RNA-directed RNA polymerase, Transferase |
Biological process | Viral RNA replication |
Ligand | Nucleotide-binding |
Names & Taxonomyi
Protein namesi | |
Organismi | White clover cryptic virus 1 (isolate Boccardo/2004) (WCCV-1) |
Taxonomic identifieri | 654934 [NCBI] |
Taxonomic lineagei | Viruses › Riboviria › Orthornavirae › Pisuviricota › Duplopiviricetes › Durnavirales › Partitiviridae › Alphapartitivirus › |
Virus hosti | Trifolium repens (Creeping white clover) [TaxID: 3899] |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000402794 | 1 – 616 | RNA-directed RNA polymeraseAdd BLAST | 616 |
Proteomic databases
PRIDEi | Q64FP0 |
Structurei
Family & Domainsi
Family and domain databases
InterProi | View protein in InterPro IPR043502, DNA/RNA_pol_sf IPR001205, RNA-dir_pol_C |
Pfami | View protein in Pfam PF00680, RdRP_1, 1 hit |
SUPFAMi | SSF56672, SSF56672, 1 hit |
i Sequence
Sequence statusi: Complete.
Q64FP0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDYLITAFNR ITHWFLTPTN LEYIGSYSLP PGLLRVNDVA VANHKATLDR
60 70 80 90 100
SFDKYLYEHE INLITKEYRR SPIDEDSILE DFFSGDLPYF EIPFDEHVER
110 120 130 140 150
GLECMAAAFR PPRPCRPAHI LDVKHGYPYK WNVNAEPPFS TDEYFLSQRK
160 170 180 190 200
TFGEFIRMHE YEHIDKEDFF RRHPNIESHD FLRTVVPPKF GFLKSMIFSW
210 220 230 240 250
TRRWHHIIKS GFQDSTDLEQ TGYFFNRFIF PMLLHTKTAI VKKNDPNKMR
260 270 280 290 300
TIWGASKPWI IAETMFYWEY LAWIKHNPGA TPMLWGYETF TGGWFRLNHE
310 320 330 340 350
LFCGLIQRSF LTLDWSRFDK RAYFPLLRRI LYTVKTFLTF EEGYVPTHAA
360 370 380 390 400
PTHPQWSQEN IDRLERLWLW TLENLFEAPI ILPDGRMYRR HFAGIPSGLF
410 420 430 440 450
ITQLLDSWYN YTMLATILSA LHFDPLHCII KVQGDDSILR LTTLIPVDQH
460 470 480 490 500
TNFMDHIVRL ADTYFNSIVN VKKSEVRNSL NGCEVLSYRN HNGLPHRDEI
510 520 530 540 550
TMLAQFYHTK ARDPTPEITM AQAIGFAYAS CANHNRVLWV LEDVYNYYRD
560 570 580 590 600
LGYRPNRAGL TLTFGDSPDL TMPEMPLDHF PTKSEIRRYH TETHYQNEAQ
610
NARTWPRTLF INAPGE
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AY705784 Genomic RNA Translation: AAU14888.1 |
RefSeqi | YP_086754.1, NC_006275.1 |
Genome annotation databases
GeneIDi | 5076437 |
KEGGi | vg:5076437 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AY705784 Genomic RNA Translation: AAU14888.1 |
RefSeqi | YP_086754.1, NC_006275.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PRIDEi | Q64FP0 |
Genome annotation databases
GeneIDi | 5076437 |
KEGGi | vg:5076437 |
Family and domain databases
InterProi | View protein in InterPro IPR043502, DNA/RNA_pol_sf IPR001205, RNA-dir_pol_C |
Pfami | View protein in Pfam PF00680, RdRP_1, 1 hit |
SUPFAMi | SSF56672, SSF56672, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | RDRP_WCCVB | |
Accessioni | Q64FP0Primary (citable) accession number: Q64FP0 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | January 11, 2011 |
Last sequence update: | October 25, 2004 | |
Last modified: | September 29, 2021 | |
This is version 46 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Viral Protein Annotation Program |