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Entry version 70 (07 Oct 2020)
Sequence version 1 (25 Oct 2004)
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Protein
Submitted name:

Uncharacterized protein

Gene

BPSS2054

Organism
Burkholderia pseudomallei (strain K96243)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
BPSE272560:G1G3Q-5760-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:BPSS2054Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBurkholderia pseudomallei (strain K96243)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri272560 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000605 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
272560.BPSS2054

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
COG3209, Bacteria

Identification of Orthologs from Complete Genome Data

More...
OMAi
LNYNRHR

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR032724, Deaminase_SCP1201
IPR014756, Ig_E-set
IPR022385, Rhs_assc_core
IPR031325, RHS_repeat
IPR006530, YD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05593, RHS_repeat, 7 hits
PF14428, SCP1201-deam, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF81296, SSF81296, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03696, Rhs_assc_core, 1 hit
TIGR01643, YD_repeat_2x, 12 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q63IL6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MALPAVKHLD PVVGIDVHSV LVTPGTPPVF LPHPYVGFML DRREYIDAAL
60 70 80 90 100
GVIGSIVFTF TPLGKEADAG LKWAKKQAKA ELMSDPLIAE GVKLGKEAAP
110 120 130 140 150
VAGDIAGAVG AGVGMGSMMG RPIFVNGFLR ATAGTHSFHV PGLHFPLGES
160 170 180 190 200
FAPPPEDFEP SNDGESYMGS RTVLANNDPM SFMALPAMSC WSVGLEPPPH
210 220 230 240 250
NGAHTQRTAL SMPSSVMLPI PVGRPVLVGG PPVMNMAALA SSLFKAFRGS
260 270 280 290 300
DWAKALADKL HLKPGFLRCN VLRAEPVDAI TGEVVVQQHD FTVPGRLPLV
310 320 330 340 350
WNRYYTSHDT YVGAVGIGWQ TPADIRLELT RHEGAVGVVA YFPDHATAFD
360 370 380 390 400
AIPDAAGWPA RVYDWQHGQA LYRQDDRLVL RTRAGFEYEF ALPAHWQHAL
410 420 430 440 450
ERLAEDATLT LPVERMADLN GNAWVFERGL DSSLTRLVEW KAEEATGRMI
460 470 480 490 500
ACAASASSRA GDHVSLLTAL TLIDAGGRAH PLVSYQHDRN VDLVAAIDAM
510 520 530 540 550
GQPHRYAYTD GHRMISHTSA RGISFYYSHR RHDDGVWRVD HAWGDNGLFD
560 570 580 590 600
YRFIYDPARH ETRITDSLGH TTLLQSDERG MPVARIDPLG GVTSYRYDAQ
610 620 630 640 650
GRTNAETDPA GRTTAWEYDT FANLLMRTLP DGTALRTEYN TGHKPVCVAV
660 670 680 690 700
PGGGQWRYTW DERGNLLMQT TPSQASVRYA YDQYGQLIAH TGPRGTVTRF
710 720 730 740 750
DYDRSGLLAV RTDALGHRTQ YTHDALGNLV HVINALGQTS RYEYDNIGNL
760 770 780 790 800
TRAIEPGGRE VHCVYDADGN LVRYRDATGN VTQLVYTALG HISKRQTPDG
810 820 830 840 850
NVVEYRYDTE EQLVGVVNGR GEIYEIKRDE LGRIVEETDY WGQPRHYRYG
860 870 880 890 900
AAGELLDITD PLGQTIEYRC DRLGRVVEKR MPDPLHPDGV RIDRFVYDQH
910 920 930 940 950
GDLVLAENPS SRVEFRYDAD GRVIAERQGD DFTIASTYDA SGNRTERKTR
960 970 980 990 1000
LVADSDVVEH TVRYEYDALD AVIAIQIDDA APIVLERDAV GQVCVEQLSP
1010 1020 1030 1040 1050
ELRRELSYEA GGQLAKQTLL GGTGLLFASE YAYDANDELV EKRDSRTGVE
1060 1070 1080 1090 1100
RFKYDPVGRI VAHTDPTGRL RSYVYDPAGD LLKTHIHERR TAGATEMTQT
1110 1120 1130 1140 1150
GTWVREGEFE GHYHAYDRAG NLIRRQDVGQ DLTLRWDAAG QLAEAVAVRP
1160 1170 1180 1190 1200
AIAGAGGGQV RIGTQYEYDA FRRRVGKLVL TRAAGSAELV LSRISRFFWD
1210 1220 1230 1240 1250
GNTLVGQCTR GGGEGGGTAI PDAGDRMPAA QFIPVRDNRD DAPVSGFEHA
1260 1270 1280 1290 1300
YEWVYYPGMF RPLAVVHCDL AATRASVPTT TNLLPLIGAV YFFQSDLNGA
1310 1320 1330 1340 1350
PVQMHAPGGR VVWEARYDPI GRSEQLGLQL VEQPVRLQGQ YFDAETGLNY
1360 1370 1380 1390 1400
NRHRYFDPNS GIFISQDPIR LSGGLNLYQY APETNNWIDP LGCSGHRRRH
1410 1420 1430 1440 1450
EKMPPEGARL TTGNLFRHAQ DEGISPILSS KNDEFYYRLI KIYAGTGMLN
1460 1470 1480 1490 1500
ANIRGIASHV EPKAGLILNE DGSGWKIGSL YINYPNGPCL DCRTLMPFIL
1510 1520 1530 1540
NDGSILYVTF PTLGLDGYSY GHFHGREPGF FREGTPCNLP HPE
Length:1,543
Mass (Da):170,462
Last modified:October 25, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iB9666C57D7FE8D1B
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
BX571966 Genomic DNA Translation: CAH39532.1

NCBI Reference Sequences

More...
RefSeqi
YP_112056.1, NC_006351.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
CAH39532; CAH39532; BPSS2054

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bps:BPSS2054

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|272560.51.peg.5594

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571966 Genomic DNA Translation: CAH39532.1
RefSeqiYP_112056.1, NC_006351.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi272560.BPSS2054

Genome annotation databases

EnsemblBacteriaiCAH39532; CAH39532; BPSS2054
KEGGibps:BPSS2054
PATRICifig|272560.51.peg.5594

Phylogenomic databases

eggNOGiCOG3209, Bacteria
OMAiLNYNRHR

Enzyme and pathway databases

BioCyciBPSE272560:G1G3Q-5760-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR032724, Deaminase_SCP1201
IPR014756, Ig_E-set
IPR022385, Rhs_assc_core
IPR031325, RHS_repeat
IPR006530, YD
PfamiView protein in Pfam
PF05593, RHS_repeat, 7 hits
PF14428, SCP1201-deam, 1 hit
SUPFAMiSSF81296, SSF81296, 1 hit
TIGRFAMsiTIGR03696, Rhs_assc_core, 1 hit
TIGR01643, YD_repeat_2x, 12 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ63IL6_BURPS
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q63IL6
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: October 7, 2020
This is version 70 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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