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Protein
Submitted name:

RCG21090

Gene

Sp4

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
RCG21090Imported
Submitted name:
Sp4 transcription factorImported
Submitted name:
Zinc finger proteinImported
Gene namesi
Name:Sp4Imported
Synonyms:HF-1bImported
ORF Names:rCG_21090Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi3741 Sp4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiQ63158

Expressioni

Gene expression databases

BgeeiENSRNOG00000005472 Expressed in 9 organ(s), highest expression level in spleen

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007625

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini646 – 675C2H2-typeInterPro annotationAdd BLAST30
Domaini676 – 705C2H2-typeInterPro annotationAdd BLAST30
Domaini706 – 733C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
HOGENOMiHOG000234295
HOVERGENiHBG008933
KOiK09194
OMAiCHMEGCG
OrthoDBiEOG091G0HX6
TreeFamiTF350150

Family and domain databases

InterProiView protein in InterPro
IPR030453 SP4
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR23235:SF17 PTHR23235:SF17, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequencei

Sequence statusi: Complete.

Q63158-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSDQKKEEEE EAAAAMATEG GKTSEPENNN KKPKTSGSQD SQPSPLALLA
60 70 80 90 100
ATCSKIGTPG ENQATGQQQI IIDPSQGLVQ LQNQPQQLEL VTTQLAGNAW
110 120 130 140 150
QLVASTPPAS KENNVSQPAS SSSSSSSSNN GSSSPTKTKS GNPSTPNQFQ
160 170 180 190 200
VIQVQNPSGS VQYQVIPQLQ TVEGQQIQIN PTSSSSLQDL QGQIQLISAG
210 220 230 240 250
NNQAILTAAN RTASGNILAQ NLANQTVPVQ IRPGVSIPLQ LQTLPGTQAQ
260 270 280 290 300
VVTTLPINIG GVTLALPVIN NVTAGGGTGQ VGQPTTTTTD SGTSNGNQLV
310 320 330 340 350
STPTTSTAPA STMPESPSSS TTCTTTASTS LTSSDTLVSS ADTGQYASTS
360 370 380 390 400
ASSSERTIEE PQTPAATESE AQSSSQLQSN GIQNAQDQSN SLQQVQIVGQ
410 420 430 440 450
PILQQIQIQQ PQQQIIQAIP PQSFQLQSGQ TIQTIQQQPL QNVQLQAVNP
460 470 480 490 500
TQVLIRAPTL TPSGQISWQT VQVQNIQSLS NLQVQNAGLS QQLTITPVSS
510 520 530 540 550
SGGTTLAQIA PVAVAGAPIT LNTAQLASVP NLQTVSVANL GAAGVQVQGV
560 570 580 590 600
PVTITSVAGQ QQGQDGVKVQ QATIAPVTVA VGGIANATIG AVSPDQLTQV
610 620 630 640 650
HLQQGQQTSD AEVQPGKRLR RVACSCPNCR EGEGRGSSEP GKKKQHVCHI
660 670 680 690 700
EGCGKVYGKT SHLRAHLRWH TGERPFICNW MFCGKRFTRS DELQRHRRTH
710 720 730 740 750
TGEKRFECPE CSKRFMRSDH LSKHVKTHQN KKGGGTALAI VTSGELDSSV
760 770 780
TEVLGSPRIV TVAAISQDSN PATPNVSTNM EEF
Length:783
Mass (Da):81,984
Last modified:November 1, 1996 - v1
Checksum:i394AA6D4DEA5A197
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07065921 Genomic DNA No translation available.
U07610 mRNA Translation: AAA17375.1
CH474038 Genomic DNA Translation: EDL89090.1
PIRiA48143
RefSeqiNP_036893.1, NM_012761.1
UniGeneiRn.9989

Genome annotation databases

EnsembliENSRNOT00000007625; ENSRNOP00000007625; ENSRNOG00000005472
GeneIDi25162
KEGGirno:25162
UCSCiRGD:3741 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07065921 Genomic DNA No translation available.
U07610 mRNA Translation: AAA17375.1
CH474038 Genomic DNA Translation: EDL89090.1
PIRiA48143
RefSeqiNP_036893.1, NM_012761.1
UniGeneiRn.9989

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007625

Proteomic databases

PRIDEiQ63158

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000007625; ENSRNOP00000007625; ENSRNOG00000005472
GeneIDi25162
KEGGirno:25162
UCSCiRGD:3741 rat

Organism-specific databases

CTDi6671
RGDi3741 Sp4

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
HOGENOMiHOG000234295
HOVERGENiHBG008933
KOiK09194
OMAiCHMEGCG
OrthoDBiEOG091G0HX6
TreeFamiTF350150

Gene expression databases

BgeeiENSRNOG00000005472 Expressed in 9 organ(s), highest expression level in spleen

Family and domain databases

InterProiView protein in InterPro
IPR030453 SP4
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR23235:SF17 PTHR23235:SF17, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiQ63158_RAT
AccessioniPrimary (citable) accession number: Q63158
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 7, 2018
This is version 133 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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