UniProtKB - Q62447 (CCNC_MOUSE)
Cyclin-C
Ccnc
Functioni
GO - Molecular functioni
- cyclin-dependent protein serine/threonine kinase regulator activity Source: GO_Central
- identical protein binding Source: MGI
GO - Biological processi
- negative regulation of triglyceride metabolic process Source: MGI
- positive regulation of transcription by RNA polymerase II Source: GO_Central
- protein ubiquitination Source: MGI
- regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Molecular function | Activator, Cyclin, Repressor |
Biological process | Transcription, Transcription regulation |
Enzyme and pathway databases
Reactomei | R-MMU-212436, Generic Transcription Pathway R-MMU-2173796, SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
Names & Taxonomyi
Protein namesi | Recommended name: Cyclin-C |
Gene namesi | Name:Ccnc |
Organismi | Mus musculus (Mouse) |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:1858199, Ccnc |
Subcellular locationi
Nucleus
- Nucleus Curated
Nucleus
- mediator complex Source: MGI
- nucleoplasm Source: Reactome
- nucleus Source: MGI
Other locations
- ubiquitin ligase complex Source: MGI
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000080421 | 1 – 283 | Cyclin-CAdd BLAST | 283 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 275 | PhosphoserineBy similarity | 1 |
Keywords - PTMi
PhosphoproteinProteomic databases
EPDi | Q62447 |
MaxQBi | Q62447 |
PaxDbi | Q62447 |
PRIDEi | Q62447 |
PTM databases
PhosphoSitePlusi | Q62447 |
Expressioni
Gene expression databases
Bgeei | ENSMUSG00000028252, Expressed in meninx and 305 other tissues |
ExpressionAtlasi | Q62447, baseline and differential |
Genevisiblei | Q62447, MM |
Interactioni
Subunit structurei
Component of the Mediator complex, which is composed of MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The MED12, MED13, CCNC and CDK8 subunits form a distinct module termed the CDK8 module. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. The cylin/CDK pair formed by CCNC/CDK8 also associates with the large subunit of RNA polymerase II (By similarity).
By similarityGO - Molecular functioni
- identical protein binding Source: MGI
Protein-protein interaction databases
BioGRIDi | 206188, 2 interactors |
ComplexPortali | CPX-3266, CKM complex variant 1 CPX-3267, CKM complex variant 2 CPX-331, Cyclin C-CDK3 complex |
CORUMi | Q62447 |
DIPi | DIP-61081N |
IntActi | Q62447, 4 interactors |
STRINGi | 10090.ENSMUSP00000100062 |
Chemistry databases
BindingDBi | Q62447 |
Miscellaneous databases
RNActi | Q62447, protein |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 20 – 151 | Cyclin N-terminalAdd BLAST | 132 |
Sequence similaritiesi
Phylogenomic databases
eggNOGi | KOG0794, Eukaryota |
GeneTreei | ENSGT00940000155625 |
InParanoidi | Q62447 |
OMAi | ANYWEST |
OrthoDBi | 1079428at2759 |
Family and domain databases
CDDi | cd00043, CYCLIN, 2 hits |
InterProi | View protein in InterPro IPR013763, Cyclin-like IPR036915, Cyclin-like_sf IPR043198, Cyclin/Ssn8 IPR006671, Cyclin_N IPR028367, CyclinC/Ssn8 |
PANTHERi | PTHR10026, PTHR10026, 1 hit PTHR10026:SF7, PTHR10026:SF7, 1 hit |
Pfami | View protein in Pfam PF00134, Cyclin_N, 1 hit |
SMARTi | View protein in SMART SM00385, CYCLIN, 2 hits |
SUPFAMi | SSF47954, SSF47954, 2 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All
10 20 30 40 50
MAGNFWQSSH YLQWILDKQD LLKERQKDLK FLSEEEYWKL QIFFTNVIQA
60 70 80 90 100
LGEHLKLRQQ VIATATVYFK RFYARYSLKS IDPVLMAPTC VFLASKVEEF
110 120 130 140 150
GVVSNTRLIA ATTSVLKTRF SYAFPKEFPY RMNHILECEF YLLELMDCCL
160 170 180 190 200
IVYHPYRPLL QYVQDMGQED VLLPLAWRIV NDTYRTDLCL LYPPFMIALA
210 220 230 240 250
CLHVACVVQQ KDARQWFAEL SVDMEKILEI IRVILKLYEQ WKNFDERKEM
260 270 280
ATILSKMPKP KPPPNSEGEQ GPNGSQNSSY SQS
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketQ8CAS3 | Q8CAS3_MOUSE | Cyclin-C | Ccnc | 282 | Annotation score: | ||
Q3UXL9 | Q3UXL9_MOUSE | Cyclin-C | Ccnc | 266 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 73 | Y → D in AAB05260 (Ref. 1) Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U62638 mRNA Translation: AAB05260.1 U49050 Genomic DNA Translation: AAD11444.1 AL772187 Genomic DNA No translation available. CH466538 Genomic DNA Translation: EDL05561.1 BC003344 mRNA Translation: AAH03344.2 BC120649 mRNA Translation: AAI20650.1 BC120677 mRNA Translation: AAI20678.1 AJ243075, AJ243076 Genomic DNA Translation: CAB45390.1 |
CCDSi | CCDS17998.1 |
RefSeqi | NP_001277351.1, NM_001290422.1 NP_058026.2, NM_016746.4 |
Genome annotation databases
Ensembli | ENSMUST00000102997; ENSMUSP00000100062; ENSMUSG00000028252 |
GeneIDi | 51813 |
KEGGi | mmu:51813 |
UCSCi | uc008scu.3, mouse |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U62638 mRNA Translation: AAB05260.1 U49050 Genomic DNA Translation: AAD11444.1 AL772187 Genomic DNA No translation available. CH466538 Genomic DNA Translation: EDL05561.1 BC003344 mRNA Translation: AAH03344.2 BC120649 mRNA Translation: AAI20650.1 BC120677 mRNA Translation: AAI20678.1 AJ243075, AJ243076 Genomic DNA Translation: CAB45390.1 |
CCDSi | CCDS17998.1 |
RefSeqi | NP_001277351.1, NM_001290422.1 NP_058026.2, NM_016746.4 |
3D structure databases
SMRi | Q62447 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 206188, 2 interactors |
ComplexPortali | CPX-3266, CKM complex variant 1 CPX-3267, CKM complex variant 2 CPX-331, Cyclin C-CDK3 complex |
CORUMi | Q62447 |
DIPi | DIP-61081N |
IntActi | Q62447, 4 interactors |
STRINGi | 10090.ENSMUSP00000100062 |
Chemistry databases
BindingDBi | Q62447 |
ChEMBLi | CHEMBL4296068 |
PTM databases
PhosphoSitePlusi | Q62447 |
Proteomic databases
EPDi | Q62447 |
MaxQBi | Q62447 |
PaxDbi | Q62447 |
PRIDEi | Q62447 |
Protocols and materials databases
Antibodypediai | 4188, 325 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000102997; ENSMUSP00000100062; ENSMUSG00000028252 |
GeneIDi | 51813 |
KEGGi | mmu:51813 |
UCSCi | uc008scu.3, mouse |
Organism-specific databases
CTDi | 892 |
MGIi | MGI:1858199, Ccnc |
Phylogenomic databases
eggNOGi | KOG0794, Eukaryota |
GeneTreei | ENSGT00940000155625 |
InParanoidi | Q62447 |
OMAi | ANYWEST |
OrthoDBi | 1079428at2759 |
Enzyme and pathway databases
Reactomei | R-MMU-212436, Generic Transcription Pathway R-MMU-2173796, SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
Miscellaneous databases
BioGRID-ORCSi | 51813, 11 hits in 21 CRISPR screens |
ChiTaRSi | Ccnc, mouse |
PROi | PR:Q62447 |
RNActi | Q62447, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000028252, Expressed in meninx and 305 other tissues |
ExpressionAtlasi | Q62447, baseline and differential |
Genevisiblei | Q62447, MM |
Family and domain databases
CDDi | cd00043, CYCLIN, 2 hits |
InterProi | View protein in InterPro IPR013763, Cyclin-like IPR036915, Cyclin-like_sf IPR043198, Cyclin/Ssn8 IPR006671, Cyclin_N IPR028367, CyclinC/Ssn8 |
PANTHERi | PTHR10026, PTHR10026, 1 hit PTHR10026:SF7, PTHR10026:SF7, 1 hit |
Pfami | View protein in Pfam PF00134, Cyclin_N, 1 hit |
SMARTi | View protein in SMART SM00385, CYCLIN, 2 hits |
SUPFAMi | SSF47954, SSF47954, 2 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | CCNC_MOUSE | |
Accessioni | Q62447Primary (citable) accession number: Q62447 Secondary accession number(s): Q0P542, Q5XKQ9, Q9WUZ4 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1997 |
Last sequence update: | October 3, 2012 | |
Last modified: | February 10, 2021 | |
This is version 159 of the entry and version 4 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- MGD cross-references
Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot - SIMILARITY comments
Index of protein domains and families