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Entry version 154 (29 Sep 2021)
Sequence version 1 (01 Nov 1997)
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Protein

45 kDa calcium-binding protein

Gene

Sdf4

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May regulate calcium-dependent activities in the endoplasmic reticulum lumen or post-ER compartment.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section specifies the position(s) of the calcium-binding region(s) within the protein. One common calcium-binding motif is the EF-hand, but other calcium-binding motifs also exist.<p><a href='/help/ca_bind' target='_top'>More...</a></p>Calcium bindingi110 – 1211PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi149 – 1602PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi208 – 2193PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi245 – 2564PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi290 – 3015PROSITE-ProRule annotationAdd BLAST12
Calcium bindingi326 – 3376PROSITE-ProRule annotationAdd BLAST12

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandCalcium, Metal-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
45 kDa calcium-binding protein
Short name:
Cab45
Alternative name(s):
Stromal cell-derived factor 4
Short name:
SDF-4
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Sdf4
Synonyms:Cab45
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 4

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:108079, Sdf4

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSMUSG00000029076

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Golgi apparatus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 35Sequence analysisAdd BLAST35
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000000415736 – 36145 kDa calcium-binding proteinAdd BLAST326

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi39N-linked (GlcNAc...) asparagineSequence analysis1
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei98PhosphoserineBy similarity1
Modified residuei192PhosphothreonineBy similarity1
Modified residuei216PhosphothreonineBy similarity1
Modified residuei264PhosphothreonineBy similarity1
Modified residuei298PhosphothreonineBy similarity1

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q61112

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q61112

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q61112

PeptideAtlas

More...
PeptideAtlasi
Q61112

PRoteomics IDEntifications database

More...
PRIDEi
Q61112

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
273569 [Q61112-1]
273570 [Q61112-2]

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...
GlyGeni
Q61112, 1 site

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q61112

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q61112

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Ubiquitous.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000029076, Expressed in pituitary gland and 304 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q61112, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
203141, 3 interactors

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000053175

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q61112, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q61112

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini97 – 132EF-hand 1PROSITE-ProRule annotationAdd BLAST36
Domaini136 – 171EF-hand 2PROSITE-ProRule annotationAdd BLAST36
Domaini196 – 231EF-hand 3PROSITE-ProRule annotationAdd BLAST36
Domaini232 – 267EF-hand 4PROSITE-ProRule annotationAdd BLAST36
Domaini277 – 312EF-hand 5PROSITE-ProRule annotationAdd BLAST36
Domaini313 – 348EF-hand 6PROSITE-ProRule annotationAdd BLAST36

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni308 – 361Necessary for intracellular retention in Golgi apparatus lumenAdd BLAST54

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

Binds calcium, probably via its EF-hands.

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the CREC family.Curated

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG4251, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT01010000222360

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_044718_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q61112

Identification of Orthologs from Complete Genome Data

More...
OMAi
QYINRRI

Database of Orthologous Groups

More...
OrthoDBi
1156280at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q61112

TreeFam database of animal gene trees

More...
TreeFami
TF314849

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR027240, CAB45
IPR011992, EF-hand-dom_pair
IPR018247, EF_Hand_1_Ca_BS
IPR002048, EF_hand_dom

The PANTHER Classification System

More...
PANTHERi
PTHR10827:SF51, PTHR10827:SF51, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13202, EF-hand_5, 1 hit
PF13499, EF-hand_7, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00054, EFh, 5 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF47473, SSF47473, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00018, EF_HAND_1, 5 hits
PS50222, EF_HAND_2, 5 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q61112-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MVWLVAMTPR QSSLCGLAAH GLWFLGLVLL MDATARPANH SSTRERAANR
60 70 80 90 100
EENEIMPPDH LNGVKLEMDG HLNKDFHQEV FLGKDMDGFD EDSEPRRSRR
110 120 130 140 150
KLMVIFSKVD VNTDRRISAK EMQHWIMEKT AEHFQEAVKE NKLHFRAVDP
160 170 180 190 200
DGDGHVSWDE YKVKFLASKG HNEREIAEAI KNHEELKVDE ETQEVLGNLR
210 220 230 240 250
DRWYQADNPP ADLLLTEDEF LSFLHPEHSR GMLKFMVKEI FRDLDQDGDK
260 270 280 290 300
QLSLPEFISL PVGTVENQQG QDIDDNWVKD RKKEFEELID SNHDGIVTME
310 320 330 340 350
ELENYMDPMN EYNALNEAKQ MIAIADENQN HHLEPEEILK YSEFFTGSKL
360
MDYARNVHEE F
Length:361
Mass (Da):42,064
Last modified:November 1, 1997 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2599E99F5F81A913
GO
Isoform 2 (identifier: Q61112-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     192-218: TQEVLGNLRDRWYQADNPPADLLLTED → IALHFLLLTGGPLSCSSGETSICLSRL
     219-361: Missing.

Show »
Length:218
Mass (Da):24,843
Checksum:i4E2CEDDA099881ED
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural varianti281R → K in CAB45A. 1 Publication1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_037450192 – 218TQEVL…LLTED → IALHFLLLTGGPLSCSSGET SICLSRL in isoform 2. 1 PublicationAdd BLAST27
Alternative sequenceiVSP_037451219 – 361Missing in isoform 2. 1 PublicationAdd BLAST143

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
U45977 mRNA Translation: AAB01812.1
U45978 mRNA Translation: AAB01813.1
D50461 mRNA Translation: BAA09052.1
AK157860 mRNA Translation: BAE34238.1
AK163400 mRNA Translation: BAE37334.1
AK167113 mRNA Translation: BAE39261.1
AL627204 Genomic DNA No translation available.
CH466594 Genomic DNA Translation: EDL15066.1
BC068152 mRNA Translation: AAH68152.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS19054.1 [Q61112-1]
CCDS80198.1 [Q61112-2]

NCBI Reference Sequences

More...
RefSeqi
NP_001289396.1, NM_001302467.1 [Q61112-1]
NP_001289397.1, NM_001302468.1 [Q61112-1]
NP_001289398.1, NM_001302469.1 [Q61112-2]
NP_035471.1, NM_011341.5 [Q61112-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000050078; ENSMUSP00000053175; ENSMUSG00000029076 [Q61112-1]
ENSMUST00000097734; ENSMUSP00000095340; ENSMUSG00000029076 [Q61112-2]
ENSMUST00000105578; ENSMUSP00000101203; ENSMUSG00000029076 [Q61112-1]
ENSMUST00000105579; ENSMUSP00000101204; ENSMUSG00000029076 [Q61112-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
20318

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:20318

UCSC genome browser

More...
UCSCi
uc008wfr.2, mouse [Q61112-1]
uc056zys.1, mouse [Q61112-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U45977 mRNA Translation: AAB01812.1
U45978 mRNA Translation: AAB01813.1
D50461 mRNA Translation: BAA09052.1
AK157860 mRNA Translation: BAE34238.1
AK163400 mRNA Translation: BAE37334.1
AK167113 mRNA Translation: BAE39261.1
AL627204 Genomic DNA No translation available.
CH466594 Genomic DNA Translation: EDL15066.1
BC068152 mRNA Translation: AAH68152.1
CCDSiCCDS19054.1 [Q61112-1]
CCDS80198.1 [Q61112-2]
RefSeqiNP_001289396.1, NM_001302467.1 [Q61112-1]
NP_001289397.1, NM_001302468.1 [Q61112-1]
NP_001289398.1, NM_001302469.1 [Q61112-2]
NP_035471.1, NM_011341.5 [Q61112-1]

3D structure databases

SMRiQ61112
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi203141, 3 interactors
STRINGi10090.ENSMUSP00000053175

PTM databases

GlyGeniQ61112, 1 site
iPTMnetiQ61112
PhosphoSitePlusiQ61112

Proteomic databases

EPDiQ61112
jPOSTiQ61112
PaxDbiQ61112
PeptideAtlasiQ61112
PRIDEiQ61112
ProteomicsDBi273569 [Q61112-1]
273570 [Q61112-2]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
26159, 288 antibodies

The DNASU plasmid repository

More...
DNASUi
20318

Genome annotation databases

EnsembliENSMUST00000050078; ENSMUSP00000053175; ENSMUSG00000029076 [Q61112-1]
ENSMUST00000097734; ENSMUSP00000095340; ENSMUSG00000029076 [Q61112-2]
ENSMUST00000105578; ENSMUSP00000101203; ENSMUSG00000029076 [Q61112-1]
ENSMUST00000105579; ENSMUSP00000101204; ENSMUSG00000029076 [Q61112-1]
GeneIDi20318
KEGGimmu:20318
UCSCiuc008wfr.2, mouse [Q61112-1]
uc056zys.1, mouse [Q61112-2]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
51150
MGIiMGI:108079, Sdf4
VEuPathDBiHostDB:ENSMUSG00000029076

Phylogenomic databases

eggNOGiKOG4251, Eukaryota
GeneTreeiENSGT01010000222360
HOGENOMiCLU_044718_1_0_1
InParanoidiQ61112
OMAiQYINRRI
OrthoDBi1156280at2759
PhylomeDBiQ61112
TreeFamiTF314849

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
20318, 1 hit in 62 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Sdf4, mouse

Protein Ontology

More...
PROi
PR:Q61112
RNActiQ61112, protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000029076, Expressed in pituitary gland and 304 other tissues
GenevisibleiQ61112, MM

Family and domain databases

InterProiView protein in InterPro
IPR027240, CAB45
IPR011992, EF-hand-dom_pair
IPR018247, EF_Hand_1_Ca_BS
IPR002048, EF_hand_dom
PANTHERiPTHR10827:SF51, PTHR10827:SF51, 1 hit
PfamiView protein in Pfam
PF13202, EF-hand_5, 1 hit
PF13499, EF-hand_7, 1 hit
SMARTiView protein in SMART
SM00054, EFh, 5 hits
SUPFAMiSSF47473, SSF47473, 2 hits
PROSITEiView protein in PROSITE
PS00018, EF_HAND_1, 5 hits
PS50222, EF_HAND_2, 5 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCAB45_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q61112
Secondary accession number(s): Q3TK84, Q3TQP8, Q61113
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: September 29, 2021
This is version 154 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
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