Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Endo-1,4-beta-xylanase B

Gene

xynB

Organism
Thermotoga neapolitana
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei153Proton donorBy similarity1
Active sitei259NucleophileBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Polysaccharide degradation, Xylan degradation

Protein family/group databases

CAZyiGH10 Glycoside Hydrolase Family 10

Names & Taxonomyi

Protein namesi
Recommended name:
Endo-1,4-beta-xylanase B (EC:3.2.1.8)
Short name:
Xylanase B
Alternative name(s):
1,4-beta-D-xylan xylanohydrolase B
Gene namesi
Name:xynB
OrganismiThermotoga neapolitana
Taxonomic identifieri2337 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_000000798820 – 346Endo-1,4-beta-xylanase BAdd BLAST327

Structurei

3D structure databases

ProteinModelPortaliQ60041
SMRiQ60041
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 338GH10PROSITE-ProRule annotationAdd BLAST298

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105D9F Bacteria
COG3693 LUCA

Family and domain databases

InterProiView protein in InterPro
IPR001000 GH10
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF00331 Glyco_hydro_10, 1 hit
PRINTSiPR00134 GLHYDRLASE10
SMARTiView protein in SMART
SM00633 Glyco_10, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS51760 GH10_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q60041-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKGLPALLLL LIGCVSSFGS QDVPLRVLAE KLNIHIGFAA GNNFWSLPDA
60 70 80 90 100
EKYMEVAKRE FNILTPGNQM KWDTIHPERN RYNFEPAEKH VEFALKNDMI
110 120 130 140 150
VHGHTLVWHN QLPGWLTGQE WSKEELLNIL EDHVKTVVSH FRGRVKIWDV
160 170 180 190 200
VNEAVSDSGT YRESIWYRTI GPEYIEKALI WAKEADPDAI LIYNDYNIEE
210 220 230 240 250
INAKSNFVYN MIKNLREKGV PIDGIGFQMH IDYRGINYES FKKNLERFAE
260 270 280 290 300
LGLQIYITEM DRGFPLGGSV GYYLKKQAEV YRRIFEICLD NPAVRAIQFW
310 320 330 340
GFTDKYSWVP GFFKGYGKAL IFDENYNPKP CYFAIRELME EKLKER
Length:346
Mass (Da):40,338
Last modified:November 1, 1997 - v1
Checksum:i5E96C39D46173595
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z49961 Genomic DNA Translation: CAA90235.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z49961 Genomic DNA Translation: CAA90235.1

3D structure databases

ProteinModelPortaliQ60041
SMRiQ60041
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH10 Glycoside Hydrolase Family 10

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105D9F Bacteria
COG3693 LUCA

Family and domain databases

InterProiView protein in InterPro
IPR001000 GH10
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF00331 Glyco_hydro_10, 1 hit
PRINTSiPR00134 GLHYDRLASE10
SMARTiView protein in SMART
SM00633 Glyco_10, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS51760 GH10_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiXYNB_THENE
AccessioniPrimary (citable) accession number: Q60041
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: July 5, 2017
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again