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UniProtKB - Q5ZVF2 (Q5ZVF2_LEGPH)

Entry version 60 (11 Dec 2019)
Sequence version 1 (23 Nov 2004)
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Protein
Submitted name:

Coiled-coil-containing protein

Gene

legC5

Organism
Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Protein family/group databases

Carbohydrate-Active enZymes

More...CAZyi		GT88 Glycosyltransferase Family 88

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Coiled-coil-containing proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:legC5Imported
Ordered Locus Names:lpg1488Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiLegionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri272624 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Legionellaceae › Legionella ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000609 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q5ZVF2

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		272624.lpg1488

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q5ZVF2

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili628 – 720Sequence analysisAdd BLAST93

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410ZPKM LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000278192

KEGG Orthology (KO)

More...KOi		K15490

Identification of Orthologs from Complete Genome Data

More...OMAi		KFDLCAL

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR031757 Glyco_transf_88

Pfam protein domain database

More...Pfami		View protein in Pfam
PF16849 Glyco_transf_88, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q5ZVF2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKEQQKAIFI ENIKSTCAVD EQMAKELADS LLEIHQLNTG VNEQTLINEV 
        60         70         80         90        100
FLTKFALYLK IGKEVALDWV RKNKDLDTPF PSNTVENQPA QDAKKPVENK 
       110        120        130        140        150
VQVYGAMTVG SSPVNKTLNR LTNDLLKEVV ERGKTQKAQK LRAYIFDQLA 
       160        170        180        190        200
RRLEASLSQE QINDLYNRIR GTGDYTKSES FSEEQLKILK EKVVPELKRE 
       210        220        230        240        250
LSDLSNGNVN ILGLDVSRED KYAFDTTNIF SVWFSNNPAV YMPQHVKTQV 
       260        270        280        290        300
EKTAKLNQPG KTRIVFSSLC LNETAQIDFQ QWAKENNIEL VDIDSIDLKS 
       310        320        330        340        350
VSETDAQLLN LAKDELGAMR KGKGGNPAAA SDLVRWVDVI IGESSTYIDI 
       360        370        380        390        400
DLPMNDKKVT VEVHSGFPVL LNMGSALTKD GQQPAMENPA FNTDMIAYSK 
       410        420        430        440        450
DKEARRQIIE GVAKKIIARY ENCAKYIEES KNEELVRLKN SPGYKLFVEK 
       460        470        480        490        500
TDGKFDLCTL RAAVSEAHQD ALSFATFFGA EYFAKTFATQ ELIPVIKEAI 
       510        520        530        540        550
QHQNQDLLTS VIENHIEKQH LNDYPKTPDG IKKLLKSFQG IVYKPLVMEF 
       560        570        580        590        600
SGPSAVSSSW VEAISGRSIP RNFEYLAEPM SQPLRVLQHY ACVSGKANFS 
       610        620        630        640        650
SDNIPKWCEL QSDVEKRQQQ REDGLSWLPD AQEKLKREGQ QAKLEEEQRI 
       660        670        680        690        700
KLEEEQRIKL EEEQRIKLEE EQRIKLEEEQ RIKLEEEQRI KLEEEQRIKL 
       710        720        730        740        750
EEEQRIKLEE EQRIKLEEEH KSKKYFAQSD AIDLILNNFE NEINSIGAYY 
       760        770        780        790        800
APAKQRAIEL LDTLRKYKEE AFNDPSREKL ISFAQSTKRA IQEATPILQK 
       810        820        830        840        850
DLGWGDYLTN LAKQLVNAVT FAVAYAVTFG TTGHQGFFAL KSSLAVSQSQ 
       860 
NLEGAINSEL SQKNC
Length:865
Mass (Da):98,489
Last modified:November 23, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i0EFA8CFAC1D30B1D
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AE017354 Genomic DNA Translation: AAU27570.1

NCBI Reference Sequences

More...RefSeqi		WP_010947217.1, NC_002942.5
YP_095517.1, NC_002942.5

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		AAU27570; AAU27570; lpg1488

Database of genes from NCBI RefSeq genomes

More...GeneIDi		19833053

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		lpn:lpg1488

Pathosystems Resource Integration Center (PATRIC)

More...PATRICi		fig|272624.6.peg.1561

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017354 Genomic DNA Translation: AAU27570.1
RefSeqiWP_010947217.1, NC_002942.5
YP_095517.1, NC_002942.5

3D structure databases

SMRiQ5ZVF2
ModBaseiSearch...

Protein-protein interaction databases

STRINGi272624.lpg1488

Protein family/group databases

CAZyiGT88 Glycosyltransferase Family 88

Proteomic databases

PaxDbiQ5ZVF2

Genome annotation databases

EnsemblBacteriaiAAU27570; AAU27570; lpg1488
GeneIDi19833053
KEGGilpn:lpg1488
PATRICifig|272624.6.peg.1561

Phylogenomic databases

eggNOGiENOG410ZPKM LUCA
HOGENOMiHOG000278192
KOiK15490
OMAiKFDLCAL

Family and domain databases

InterProiView protein in InterPro
IPR031757 Glyco_transf_88
PfamiView protein in Pfam
PF16849 Glyco_transf_88, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ5ZVF2_LEGPH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q5ZVF2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 23, 2004
Last sequence update: November 23, 2004
Last modified: December 11, 2019
This is version 60 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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Main funding by: National Institutes of Health

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