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Protein

Tesmin

Gene

Tesmin

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

May have a role in spermatogenesis.Curated

GO - Biological processi

Keywordsi

Molecular functionDevelopmental protein
Biological processDifferentiation, Spermatogenesis

Names & Taxonomyi

Protein namesi
Recommended name:
Tesmin
Alternative name(s):
Metallothionein-like 5, testis-specific
Gene namesi
Name:TesminImported
Synonyms:Mtl5
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1309788 Tesmin

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003492731 – 475TesminAdd BLAST475

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei34PhosphoserineCombined sources1
Modified residuei67PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ5XHX9
PRIDEiQ5XHX9

PTM databases

iPTMnetiQ5XHX9
PhosphoSitePlusiQ5XHX9

Expressioni

Gene expression databases

BgeeiENSRNOG00000014671 Expressed in 6 organ(s), highest expression level in testis

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000019861

Structurei

3D structure databases

SMRiQ5XHX9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini263 – 372CRCPROSITE-ProRule annotationAdd BLAST110

Sequence similaritiesi

Belongs to the lin-54 family.Curated

Phylogenomic databases

eggNOGiKOG1171 Eukaryota
ENOG4110UR5 LUCA
GeneTreeiENSGT00390000013974
HOGENOMiHOG000082453
HOVERGENiHBG108153
InParanoidiQ5XHX9
OMAiAGYCDCF
OrthoDBiEOG091G09E2
PhylomeDBiQ5XHX9
TreeFamiTF313189

Family and domain databases

InterProiView protein in InterPro
IPR005172 CRC
IPR028307 Lin-54_fam
IPR033467 Tesmin/TSO1-like_CXC
PANTHERiPTHR12446 PTHR12446, 1 hit
PfamiView protein in Pfam
PF03638 TCR, 1 hit
SMARTiView protein in SMART
SM01114 CXC, 1 hit
PROSITEiView protein in PROSITE
PS51634 CRC, 1 hit

Sequencei

Sequence statusi: Complete.

Q5XHX9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDALLGAMT GPEDELGAEL FGSERAFADG LALSPAGGAA DRDELPVLAD
60 70 80 90 100
AYLGATEPGE PLLRALSPPP GAEVPAALLG DFPGLPELRS SDDAAPPPAY
110 120 130 140 150
SVHVLSSLLP GARGPALLPL SAGVRVIPVE IKEAGGGVPG SSPEDAAFQA
160 170 180 190 200
PLAQESCCKF SSSQEAEEAS GCPRKKDSSP MVICQLKGGA QMLCIDNCGA
210 220 230 240 250
RELKALHLLP QYDDQSSFPQ SELPKPMTTL VGRLLPVPAK LNLITQVDNG
260 270 280 290 300
ALPSAVNGAA FPSGPALQGP PKIALAGYCD CFSSGDFCNS CSCNNLRHEL
310 320 330 340 350
ERFKAIKACL DRNPEAFQPK MGKGRLGAAK LRHSKGCNCK RSGCLKNYCE
360 370 380 390 400
CYEAKITCSS ICKCIACKNY EESPERKMLM STPHYMEPGD FESSHHLSPA
410 420 430 440 450
KFSGPPRLRK NRQAFSCISW EVVEATCACL LAQGEEAEQE RCSPSLAEQM
460 470
VLEEFGRCLS QILHIEFKSK GLKIE
Length:475
Mass (Da):50,469
Last modified:September 2, 2008 - v2
Checksum:iFBB0DFBB345DA6A8
GO

Sequence cautioni

The sequence AAH83920 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC083920 mRNA Translation: AAH83920.1 Different initiation.
RefSeqiNP_001012069.2, NM_001012069.2
UniGeneiRn.105169

Genome annotation databases

EnsembliENSRNOT00000019861; ENSRNOP00000019861; ENSRNOG00000014671
GeneIDi309142
KEGGirno:309142
UCSCiRGD:1309788 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC083920 mRNA Translation: AAH83920.1 Different initiation.
RefSeqiNP_001012069.2, NM_001012069.2
UniGeneiRn.105169

3D structure databases

SMRiQ5XHX9
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000019861

PTM databases

iPTMnetiQ5XHX9
PhosphoSitePlusiQ5XHX9

Proteomic databases

PaxDbiQ5XHX9
PRIDEiQ5XHX9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000019861; ENSRNOP00000019861; ENSRNOG00000014671
GeneIDi309142
KEGGirno:309142
UCSCiRGD:1309788 rat

Organism-specific databases

CTDi9633
RGDi1309788 Tesmin

Phylogenomic databases

eggNOGiKOG1171 Eukaryota
ENOG4110UR5 LUCA
GeneTreeiENSGT00390000013974
HOGENOMiHOG000082453
HOVERGENiHBG108153
InParanoidiQ5XHX9
OMAiAGYCDCF
OrthoDBiEOG091G09E2
PhylomeDBiQ5XHX9
TreeFamiTF313189

Miscellaneous databases

PROiPR:Q5XHX9

Gene expression databases

BgeeiENSRNOG00000014671 Expressed in 6 organ(s), highest expression level in testis

Family and domain databases

InterProiView protein in InterPro
IPR005172 CRC
IPR028307 Lin-54_fam
IPR033467 Tesmin/TSO1-like_CXC
PANTHERiPTHR12446 PTHR12446, 1 hit
PfamiView protein in Pfam
PF03638 TCR, 1 hit
SMARTiView protein in SMART
SM01114 CXC, 1 hit
PROSITEiView protein in PROSITE
PS51634 CRC, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiMTL5_RAT
AccessioniPrimary (citable) accession number: Q5XHX9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: September 2, 2008
Last modified: September 12, 2018
This is version 81 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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