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Protein

Calmodulin-like protein 4

Gene

calml4

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Calmodulin-like protein 4
Gene namesi
Name:calml4
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-5936220 calml4

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003149351 – 153Calmodulin-like protein 4Add BLAST153

Proteomic databases

PaxDbiQ5XGC7

Expressioni

Gene expression databases

BgeeiENSXETG00000007814 Expressed in 10 organ(s), highest expression level in mesonephros

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000017065

Structurei

3D structure databases

ProteinModelPortaliQ5XGC7
SMRiQ5XGC7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 43EF-hand 1PROSITE-ProRule annotationAdd BLAST36
Domaini44 – 79EF-hand 2PROSITE-ProRule annotationAdd BLAST36
Domaini81 – 116EF-hand 3PROSITE-ProRule annotationAdd BLAST36
Domaini117 – 152EF-hand 4PROSITE-ProRule annotationAdd BLAST36

Sequence similaritiesi

Belongs to the calmodulin family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0027 Eukaryota
COG5126 LUCA
GeneTreeiENSGT00760000118901
HOGENOMiHOG000233018
HOVERGENiHBG012180
InParanoidiQ5XGC7
KOiK02183
OMAiYDKQQRG
OrthoDBiEOG091G10LL
TreeFamiTF300912

Family and domain databases

CDDicd00051 EFh, 1 hit
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR002048 EF_hand_dom
SMARTiView protein in SMART
SM00054 EFh, 2 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS50222 EF_HAND_2, 2 hits

Sequencei

Sequence statusi: Complete.

Q5XGC7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKFLSQDAI QKFKECFSLY DKKGKGKIPA GDLLTVMRCL GTCPTPGEVT
60 70 80 90 100
RHLQVHKIGK DGEVDFSTFL TIMYRQQKQE DPENEIMVAM LMSDKQKKGV
110 120 130 140 150
IPLKELRAKL TQMGEKLTPE EVDDLLKGVK VGPDGMVKYE EFVRQITLPV

PDY
Length:153
Mass (Da):17,337
Last modified:November 23, 2004 - v1
Checksum:i436A26365EF807C5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC084515 mRNA Translation: AAH84515.1
RefSeqiNP_001011117.1, NM_001011117.2
UniGeneiStr.27577

Genome annotation databases

EnsembliENSXETT00000017065; ENSXETP00000017065; ENSXETG00000007814
GeneIDi496530
KEGGixtr:496530

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC084515 mRNA Translation: AAH84515.1
RefSeqiNP_001011117.1, NM_001011117.2
UniGeneiStr.27577

3D structure databases

ProteinModelPortaliQ5XGC7
SMRiQ5XGC7
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000017065

Proteomic databases

PaxDbiQ5XGC7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000017065; ENSXETP00000017065; ENSXETG00000007814
GeneIDi496530
KEGGixtr:496530

Organism-specific databases

CTDi91860
XenbaseiXB-GENE-5936220 calml4

Phylogenomic databases

eggNOGiKOG0027 Eukaryota
COG5126 LUCA
GeneTreeiENSGT00760000118901
HOGENOMiHOG000233018
HOVERGENiHBG012180
InParanoidiQ5XGC7
KOiK02183
OMAiYDKQQRG
OrthoDBiEOG091G10LL
TreeFamiTF300912

Gene expression databases

BgeeiENSXETG00000007814 Expressed in 10 organ(s), highest expression level in mesonephros

Family and domain databases

CDDicd00051 EFh, 1 hit
InterProiView protein in InterPro
IPR011992 EF-hand-dom_pair
IPR002048 EF_hand_dom
SMARTiView protein in SMART
SM00054 EFh, 2 hits
SUPFAMiSSF47473 SSF47473, 1 hit
PROSITEiView protein in PROSITE
PS50222 EF_HAND_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiCALL4_XENTR
AccessioniPrimary (citable) accession number: Q5XGC7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 23, 2004
Last modified: September 12, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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