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Entry version 128 (18 Sep 2019)
Sequence version 1 (07 Dec 2004)
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Protein

Striatin-interacting protein 1

Gene

STRIP1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics and cell shape.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Striatin-interacting protein 1
Alternative name(s):
Protein FAM40A
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:STRIP1
Synonyms:FAM40A, KIAA1761
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Human Gene Nomenclature Database

More...
HGNCi
HGNC:25916 STRIP1

Online Mendelian Inheritance in Man (OMIM)

More...
MIMi
617918 gene

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q5VSL9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

Open Targets

More...
OpenTargetsi
ENSG00000143093

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA134939426

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
STRIP1

Domain mapping of disease mutations (DMDM)

More...
DMDMi
71648671

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001870171 – 837Striatin-interacting protein 1Add BLAST837

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1N-acetylmethionineCombined sources1
Modified residuei59PhosphoserineCombined sources1
Modified residuei335PhosphoserineCombined sources1
Modified residuei339PhosphoserineBy similarity1
Modified residuei788PhosphoserineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q5VSL9

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q5VSL9

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q5VSL9

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q5VSL9

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q5VSL9

PeptideAtlas

More...
PeptideAtlasi
Q5VSL9

PRoteomics IDEntifications database

More...
PRIDEi
Q5VSL9

ProteomicsDB human proteome resource

More...
ProteomicsDBi
65267 [Q5VSL9-1]
65268 [Q5VSL9-2]
65269 [Q5VSL9-3]
65270 [Q5VSL9-4]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q5VSL9

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q5VSL9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000143093 Expressed in 180 organ(s), highest expression level in right hemisphere of cerebellum

Genevisible search portal to normalized and curated expression data from Genevestigator

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Genevisiblei
Q5VSL9 HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
HPA060302
HPA060498

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of striatin-interacting phosphatase and kinase (STRIPAK) complex (By similarity).

Interacts with CDC42BPB (PubMed:25743393).

Interacts with CTTNBP2NL (PubMed:18782753).

By similarity2 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
124497, 66 interactors

Database of interacting proteins

More...
DIPi
DIP-51621N

Protein interaction database and analysis system

More...
IntActi
Q5VSL9, 45 interactors

Molecular INTeraction database

More...
MINTi
Q5VSL9

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000358810

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi3 – 36Pro-richAdd BLAST34

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the STRIP family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3680 Eukaryota
ENOG410XRAB LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00400000022095

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q5VSL9

Identification of Orthologs from Complete Genome Data

More...
OMAi
SKYPAYN

Database of Orthologous Groups

More...
OrthoDBi
1095402at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q5VSL9

TreeFam database of animal gene trees

More...
TreeFami
TF314205

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR040185 Far11/STRP
IPR021819 Far11/STRP_C
IPR012486 Far11/STRP_N

The PANTHER Classification System

More...
PANTHERi
PTHR13239 PTHR13239, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF11882 DUF3402, 2 hits
PF07923 N1221, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01293 DUF3402, 1 hit
SM01292 N1221, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (4)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 4 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q5VSL9-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MEPAVGGPGP LIVNNKQPQP PPPPPPAAAQ PPPGAPRAAA GLLPGGKARE
60 70 80 90 100
FNRNQRKDSE GYSESPDLEF EYADTDKWAA ELSELYSYTE GPEFLMNRKC
110 120 130 140 150
FEEDFRIHVT DKKWTELDTN QHRTHAMRLL DGLEVTAREK RLKVARAILY
160 170 180 190 200
VAQGTFGECS SEAEVQSWMR YNIFLLLEVG TFNALVELLN MEIDNSAACS
210 220 230 240 250
SAVRKPAISL ADSTDLRVLL NIMYLIVETV HQECEGDKAE WRTMRQTFRA
260 270 280 290 300
ELGSPLYNNE PFAIMLFGMV TKFCSGHAPH FPMKKVLLLL WKTVLCTLGG
310 320 330 340 350
FEELQSMKAE KRSILGLPPL PEDSIKVIRN MRAASPPASA SDLIEQQQKR
360 370 380 390 400
GRREHKALIK QDNLDAFNER DPYKADDSRE EEEENDDDNS LEGETFPLER
410 420 430 440 450
DEVMPPPLQH PQTDRLTCPK GLPWAPKVRE KDIEMFLESS RSKFIGYTLG
460 470 480 490 500
SDTNTVVGLP RPIHESIKTL KQHKYTSIAE VQAQMEEEYL RSPLSGGEEE
510 520 530 540 550
VEQVPAETLY QGLLPSLPQY MIALLKILLA AAPTSKAKTD SINILADVLP
560 570 580 590 600
EEMPTTVLQS MKLGVDVNRH KEVIVKAISA VLLLLLKHFK LNHVYQFEYM
610 620 630 640 650
AQHLVFANCI PLILKFFNQN IMSYITAKNS ISVLDYPHCV VHELPELTAE
660 670 680 690 700
SLEAGDSNQF CWRNLFSCIN LLRILNKLTK WKHSRTMMLV VFKSAPILKR
710 720 730 740 750
ALKVKQAMMQ LYVLKLLKVQ TKYLGRQWRK SNMKTMSAIY QKVRHRLNDD
760 770 780 790 800
WAYGNDLDAR PWDFQAEECA LRANIERFNA RRYDRAHSNP DFLPVDNCLQ
810 820 830
SVLGQRVDLP EDFQMNYDLW LEREVFSKPI SWEELLQ
Length:837
Mass (Da):95,576
Last modified:December 7, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5F9BA1D4C7DE6925
GO
Isoform 2 (identifier: Q5VSL9-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-95: Missing.

Note: No experimental confirmation available.
Show »
Length:742
Mass (Da):85,451
Checksum:iA4C208A05F910919
GO
Isoform 3 (identifier: Q5VSL9-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-264: Missing.
     596-596: Q → QVPTGLSLLS...FFFFFSCWLQ
     630-630: S → R
     631-837: Missing.

Note: No experimental confirmation available.
Show »
Length:440
Mass (Da):49,699
Checksum:iB1ADA0F87A30303E
GO
Isoform 4 (identifier: Q5VSL9-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     194-212: DNSAACSSAVRKPAISLAD → EHCCVRPAVSALAGGQAQD
     213-837: Missing.

Note: No experimental confirmation available.
Show »
Length:212
Mass (Da):23,540
Checksum:i636A065B51CB3595
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH32644 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti397P → L in BAC86034 (PubMed:14702039).Curated1
Sequence conflicti744R → Q in BAB55265 (PubMed:14702039).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_076430628K → N1 Publication1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0148561 – 264Missing in isoform 3. 1 PublicationAdd BLAST264
Alternative sequenceiVSP_0148571 – 95Missing in isoform 2. 1 PublicationAdd BLAST95
Alternative sequenceiVSP_014858194 – 212DNSAA…ISLAD → EHCCVRPAVSALAGGQAQD in isoform 4. 1 PublicationAdd BLAST19
Alternative sequenceiVSP_014859213 – 837Missing in isoform 4. 1 PublicationAdd BLAST625
Alternative sequenceiVSP_014860596Q → QVPTGLSLLSCGLGPRALLL LQPTRTGALAFDPLELCMNV LRHGPSAKAFHPWRKEGKVP RAAPFFFFFFSCWLQ in isoform 3. 1 Publication1
Alternative sequenceiVSP_014861630S → R in isoform 3. 1 Publication1
Alternative sequenceiVSP_014862631 – 837Missing in isoform 3. 1 PublicationAdd BLAST207

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB051548 mRNA Translation: BAB21852.2
AK027649 mRNA Translation: BAB55265.1
AK125054 mRNA Translation: BAC86034.1
AL834196 mRNA Translation: CAH56368.1
AL772411, AL160006 Genomic DNA Translation: CAH70967.1
AL772411, AL160006 Genomic DNA Translation: CAH70968.1
AL160006, AL772411 Genomic DNA Translation: CAI22715.1
AL160006, AL772411 Genomic DNA Translation: CAI22716.1
BC032644 mRNA Translation: AAH32644.1 Different initiation.
BC094786 mRNA Translation: AAH94786.1
BC119814 mRNA Translation: AAI19815.1
BC121793 mRNA Translation: AAI21794.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS30798.1 [Q5VSL9-1]
CCDS59197.1 [Q5VSL9-2]

NCBI Reference Sequences

More...
RefSeqi
NP_001257697.1, NM_001270768.1 [Q5VSL9-2]
NP_149079.2, NM_033088.3 [Q5VSL9-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000369795; ENSP00000358810; ENSG00000143093 [Q5VSL9-1]
ENST00000369796; ENSP00000358811; ENSG00000143093 [Q5VSL9-2]
ENST00000485775; ENSP00000476025; ENSG00000143093 [Q5VSL9-4]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
85369

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:85369

UCSC genome browser

More...
UCSCi
uc001dyz.2 human [Q5VSL9-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB051548 mRNA Translation: BAB21852.2
AK027649 mRNA Translation: BAB55265.1
AK125054 mRNA Translation: BAC86034.1
AL834196 mRNA Translation: CAH56368.1
AL772411, AL160006 Genomic DNA Translation: CAH70967.1
AL772411, AL160006 Genomic DNA Translation: CAH70968.1
AL160006, AL772411 Genomic DNA Translation: CAI22715.1
AL160006, AL772411 Genomic DNA Translation: CAI22716.1
BC032644 mRNA Translation: AAH32644.1 Different initiation.
BC094786 mRNA Translation: AAH94786.1
BC119814 mRNA Translation: AAI19815.1
BC121793 mRNA Translation: AAI21794.1
CCDSiCCDS30798.1 [Q5VSL9-1]
CCDS59197.1 [Q5VSL9-2]
RefSeqiNP_001257697.1, NM_001270768.1 [Q5VSL9-2]
NP_149079.2, NM_033088.3 [Q5VSL9-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGridi124497, 66 interactors
DIPiDIP-51621N
IntActiQ5VSL9, 45 interactors
MINTiQ5VSL9
STRINGi9606.ENSP00000358810

PTM databases

iPTMnetiQ5VSL9
PhosphoSitePlusiQ5VSL9

Polymorphism and mutation databases

BioMutaiSTRIP1
DMDMi71648671

Proteomic databases

EPDiQ5VSL9
jPOSTiQ5VSL9
MassIVEiQ5VSL9
MaxQBiQ5VSL9
PaxDbiQ5VSL9
PeptideAtlasiQ5VSL9
PRIDEiQ5VSL9
ProteomicsDBi65267 [Q5VSL9-1]
65268 [Q5VSL9-2]
65269 [Q5VSL9-3]
65270 [Q5VSL9-4]

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000369795; ENSP00000358810; ENSG00000143093 [Q5VSL9-1]
ENST00000369796; ENSP00000358811; ENSG00000143093 [Q5VSL9-2]
ENST00000485775; ENSP00000476025; ENSG00000143093 [Q5VSL9-4]
GeneIDi85369
KEGGihsa:85369
UCSCiuc001dyz.2 human [Q5VSL9-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
85369

GeneCards: human genes, protein and diseases

More...
GeneCardsi
STRIP1
HGNCiHGNC:25916 STRIP1
HPAiHPA060302
HPA060498
MIMi617918 gene
neXtProtiNX_Q5VSL9
OpenTargetsiENSG00000143093
PharmGKBiPA134939426

Human Unidentified Gene-Encoded large proteins database

More...
HUGEi
Search...

GenAtlas: human gene database

More...
GenAtlasi
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Phylogenomic databases

eggNOGiKOG3680 Eukaryota
ENOG410XRAB LUCA
GeneTreeiENSGT00400000022095
InParanoidiQ5VSL9
OMAiSKYPAYN
OrthoDBi1095402at2759
PhylomeDBiQ5VSL9
TreeFamiTF314205

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
STRIP1 human

The Gene Wiki collection of pages on human genes and proteins

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GeneWikii
FAM40A

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

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GenomeRNAii
85369

Pharos

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Pharosi
Q5VSL9

Protein Ontology

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PROi
PR:Q5VSL9

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSG00000143093 Expressed in 180 organ(s), highest expression level in right hemisphere of cerebellum
GenevisibleiQ5VSL9 HS

Family and domain databases

InterProiView protein in InterPro
IPR040185 Far11/STRP
IPR021819 Far11/STRP_C
IPR012486 Far11/STRP_N
PANTHERiPTHR13239 PTHR13239, 1 hit
PfamiView protein in Pfam
PF11882 DUF3402, 2 hits
PF07923 N1221, 1 hit
SMARTiView protein in SMART
SM01293 DUF3402, 1 hit
SM01292 N1221, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSTRP1_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q5VSL9
Secondary accession number(s): Q0V925
, Q5VSL8, Q658K2, Q6ZV31, Q8N598, Q96SN2, Q9C0A2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 2, 2005
Last sequence update: December 7, 2004
Last modified: September 18, 2019
This is version 128 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
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