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Protein
Submitted name:

Transcription regulator

Gene

tetR

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi33 – 52H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription regulatorImported
Gene namesi
Name:tetRImported
Ordered Locus Names:pNG7308Imported
Encoded oniPlasmid pNG700Imported
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)Imported
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Plasmid pNG700

Structurei

3D structure databases

ProteinModelPortaliQ5V649
SMRiQ5V649
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5V649

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 70HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

HOGENOMiHOG000038237
OMAiMRSQAPY
OrthoDBiPOG093Z09AA

Family and domain databases

InterProiView protein in InterPro
IPR039538 BetI_C
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
IPR036271 Tet_transcr_reg_TetR-rel_C_sf
PfamiView protein in Pfam
PF13977 TetR_C_6, 1 hit
PF00440 TetR_N, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF48498 SSF48498, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q5V649-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAGPSDRTFS DQTEEIMQAT YRALREHGYA DLTIQRIADE YGKSTAAVHY
60 70 80 90 100
YYDTKDDLLA AFLDYLLERF VDSIHDVETT DPEARLNLLL DELLVKPQEN
110 120 130 140 150
PDLSVALLEM RSQAPYKEAF SDRFRQNDEY VRYMLKAVIN HGIDEGVFTD
160 170 180 190
VDAEHVTRSL LTIIDGARTR AVMLDDTEEL ETARQTASEY ADAMLQ
Length:196
Mass (Da):22,440
Last modified:December 7, 2004 - v1
Checksum:i0491F9C7C1853F25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596296 Genomic DNA Translation: AAV45003.1
RefSeqiWP_004966015.1, NC_006395.1

Genome annotation databases

EnsemblBacteriaiAAV45003; AAV45003; pNG7308
GeneIDi3127151
KEGGihma:pNG7308
PATRICifig|272569.17.peg.735

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596296 Genomic DNA Translation: AAV45003.1
RefSeqiWP_004966015.1, NC_006395.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3CRJX-ray2.60A/B/C/D1-196[»]
ProteinModelPortaliQ5V649
SMRiQ5V649
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV45003; AAV45003; pNG7308
GeneIDi3127151
KEGGihma:pNG7308
PATRICifig|272569.17.peg.735

Phylogenomic databases

HOGENOMiHOG000038237
OMAiMRSQAPY
OrthoDBiPOG093Z09AA

Miscellaneous databases

EvolutionaryTraceiQ5V649

Family and domain databases

InterProiView protein in InterPro
IPR039538 BetI_C
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
IPR036271 Tet_transcr_reg_TetR-rel_C_sf
PfamiView protein in Pfam
PF13977 TetR_C_6, 1 hit
PF00440 TetR_N, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF48498 SSF48498, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ5V649_HALMA
AccessioniPrimary (citable) accession number: Q5V649
Entry historyiIntegrated into UniProtKB/TrEMBL: December 7, 2004
Last sequence update: December 7, 2004
Last modified: October 10, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, PlasmidImported, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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