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UniProtKB - Q5U334 (Q5U334_RAT)
Protein
Submitted name:
PVR cell adhesion molecule
Gene
Pvr
Organism
Rattus norvegicus (Rat)
Status
Functioni
GO - Molecular functioni
- cell adhesion molecule binding Source: RGD
- dynein light chain binding Source: RGD
- virus receptor activity Source: RGD
GO - Biological processi
- cell-cell adhesion Source: RGD
- cell migration Source: RGD
- heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules Source: GO_Central
- homophilic cell adhesion via plasma membrane adhesion molecules Source: GO_Central
- positive regulation of natural killer cell mediated cytotoxicity Source: RGD
- positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target Source: RGD
- susceptibility to natural killer cell mediated cytotoxicity Source: RGD
- susceptibility to T cell mediated cytotoxicity Source: RGD
Keywordsi
Molecular function | ReceptorImported |
Enzyme and pathway databases
Reactomei | R-RNO-198933, Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell R-RNO-420597, Nectin/Necl trans heterodimerization |
Protein family/group databases
MEROPSi | I43.001 |
Names & Taxonomyi
Protein namesi | Submitted name: PVR cell adhesion moleculeSubmitted name: Poliovirus receptorImported |
Gene namesi | ORF Names:rCG_53858Imported |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 3813, Pvr |
Subcellular locationi
Plasma Membrane
- plasma membrane Source: RGD
Other locations
- adherens junction Source: GO_Central
- cell surface Source: RGD
- integral component of membrane Source: RGD
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 355 – 375 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 33 | Sequence analysisAdd BLAST | 33 | |
ChainiPRO_5014310144 | 34 – 412 | Sequence analysisAdd BLAST | 379 |
Expressioni
Gene expression databases
Bgeei | ENSRNOG00000019202, Expressed in duodenum and 21 other tissues |
Interactioni
GO - Molecular functioni
- cell adhesion molecule binding Source: RGD
- dynein light chain binding Source: RGD
Structurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 48 – 143 | Ig-likeInterPro annotationAdd BLAST | 96 | |
Domaini | 152 – 234 | Ig-likeInterPro annotationAdd BLAST | 83 | |
Domaini | 242 – 337 | Ig-likeInterPro annotationAdd BLAST | 96 |
Keywords - Domaini
SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisARBA annotationPhylogenomic databases
GeneTreei | ENSGT00940000162848 |
HOGENOMi | CLU_029618_0_0_1 |
OMAi | KCISADG |
OrthoDBi | 1087343at2759 |
Family and domain databases
Gene3Di | 2.60.40.10, 3 hits |
InterProi | View protein in InterPro IPR013162, CD80_C2-set IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003599, Ig_sub IPR013106, Ig_V-set IPR013151, Immunoglobulin |
Pfami | View protein in Pfam PF08205, C2-set_2, 1 hit PF00047, ig, 1 hit PF07686, V-set, 1 hit |
SMARTi | View protein in SMART SM00409, IG, 2 hits SM00406, IGv, 1 hit |
SUPFAMi | SSF48726, SSF48726, 3 hits |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 3 hits |
i Sequence
Sequence statusi: Complete.
Q5U334-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAPLAGASRS RVWSVGLLRL LLLSCFTLQK AGGEIAVQVL SNSTGFLGGS
60 70 80 90 100
TVLHCSLASK DNVTITQLTW MKRDPDGSHP SVAVFHPKKG PSISDPERVK
110 120 130 140 150
FLVAKVYEDL RNASLAISNL RVEDEGIYEC QIATFPTGSK SANVWLKVFA
160 170 180 190 200
RPKNTAEALE PSPTLMPQDV AKCISADGHP PGRITWSSNV NGSYREMKET
210 220 230 240 250
GSQPGTTTVI SYLSMVPSSQ ADGTNITCTV EHESFQEPDQ QPLILSLPYP
260 270 280 290 300
PEVSISGYEG NWYIGLTNVN LTCEARSKPP PTNYSWSTAT GPLPNSTHFQ
310 320 330 340 350
ENGSHLLIST VDDLNNTIFV CKAINALGSG QGQVTILVKE ASEILPPKTS
360 370 380 390 400
LGTGYIIAIV FCVLIIGVVA GIVFWKYRRG CGRQSRTLDR ENVRYSAANG
410
VSVPNVETNN LR
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC085741 mRNA Translation: AAH85741.1 CH473979 Genomic DNA Translation: EDM08126.1 |
RefSeqi | NP_058772.2, NM_017076.2 |
Genome annotation databases
Ensembli | ENSRNOT00000064305.4; ENSRNOP00000061458.1; ENSRNOG00000019202.9 |
GeneIDi | 25066 |
KEGGi | rno:25066 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BC085741 mRNA Translation: AAH85741.1 CH473979 Genomic DNA Translation: EDM08126.1 |
RefSeqi | NP_058772.2, NM_017076.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein family/group databases
MEROPSi | I43.001 |
Genome annotation databases
Ensembli | ENSRNOT00000064305.4; ENSRNOP00000061458.1; ENSRNOG00000019202.9 |
GeneIDi | 25066 |
KEGGi | rno:25066 |
Organism-specific databases
CTDi | 5817 |
RGDi | 3813, Pvr |
Phylogenomic databases
GeneTreei | ENSGT00940000162848 |
HOGENOMi | CLU_029618_0_0_1 |
OMAi | KCISADG |
OrthoDBi | 1087343at2759 |
Enzyme and pathway databases
Reactomei | R-RNO-198933, Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell R-RNO-420597, Nectin/Necl trans heterodimerization |
Gene expression databases
Bgeei | ENSRNOG00000019202, Expressed in duodenum and 21 other tissues |
Family and domain databases
Gene3Di | 2.60.40.10, 3 hits |
InterProi | View protein in InterPro IPR013162, CD80_C2-set IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003599, Ig_sub IPR013106, Ig_V-set IPR013151, Immunoglobulin |
Pfami | View protein in Pfam PF08205, C2-set_2, 1 hit PF00047, ig, 1 hit PF07686, V-set, 1 hit |
SMARTi | View protein in SMART SM00409, IG, 2 hits SM00406, IGv, 1 hit |
SUPFAMi | SSF48726, SSF48726, 3 hits |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 3 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | Q5U334_RAT | |
Accessioni | Q5U334Primary (citable) accession number: Q5U334 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | December 7, 2004 |
Last sequence update: | December 7, 2004 | |
Last modified: | May 25, 2022 | |
This is version 144 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |