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UniProtKB - Q5T9C2 (F102A_HUMAN)

Entry version 117 (11 Dec 2019)
Sequence version 2 (28 Nov 2006)
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Protein

Protein FAM102A

Gene

FAM102A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May play a role in estrogen action.1 Publication

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Protein FAM102A
Alternative name(s):
Early estrogen-induced gene 1 protein
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:FAM102A
Synonyms:C9orf132, EEIG1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...EuPathDBi		HostDB:ENSG00000167106.11

Human Gene Nomenclature Database

More...HGNCi		HGNC:31419 FAM102A

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		610891 gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q5T9C2

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...DisGeNETi		399665

Open Targets

More...OpenTargetsi		ENSG00000167106

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA142671784

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...Pharosi		Q5T9C2 Tdark

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		FAM102A

Domain mapping of disease mutations (DMDM)

More...DMDMi		118572304

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002616341 – 384Protein FAM102AAdd BLAST384

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q5T9C2

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...MassIVEi		Q5T9C2

MaxQB - The MaxQuant DataBase

More...MaxQBi		Q5T9C2

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q5T9C2

PeptideAtlas

More...PeptideAtlasi		Q5T9C2

PRoteomics IDEntifications database

More...PRIDEi		Q5T9C2

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		64787 [Q5T9C2-1]
64788 [Q5T9C2-2]
64789 [Q5T9C2-3]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q5T9C2

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q5T9C2

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

By 17-beta-estradiol but also by a group of natural and synthetic estrogens as well as by estrogenic environmental compounds. Repressed by the antiestrogen 4-hydroxy-tamoxifen.

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000167106 Expressed in 223 organ(s), highest expression level in islet of Langerhans

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q5T9C2 HS

Organism-specific databases

Human Protein Atlas

More...HPAi		HPA036030

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Show more details

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		134377, 6 interactors

Protein interaction database and analysis system

More...IntActi		Q5T9C2, 11 interactors

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000362187

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q5T9C2 protein

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini2 – 145C2 NT-typePROSITE-ProRule annotationAdd BLAST144

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi157 – 268Ser-richAdd BLAST112

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the FAM102 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410IWVB Eukaryota
ENOG4110G47 LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00940000156811

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000230902

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q5T9C2

Identification of Orthologs from Complete Genome Data

More...OMAi		GGYEPVV

Database of Orthologous Groups

More...OrthoDBi		725501at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q5T9C2

TreeFam database of animal gene trees

More...TreeFami		TF320966

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR039931 FAM102-like
IPR019448 NT-C2

The PANTHER Classification System

More...PANTHERi		PTHR21456 PTHR21456, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF10358 NT-C2, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51840 C2_NT, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q5T9C2-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAFLMKKKKF KFQTTFTLEE LTAVPFVNGV LFCKVRLLDG GDFVSLSSRE 
        60         70         80         90        100
EVQENCVRWR KRFTFVCKMS ANPATGLLDP CVFRVSVRKE LKGGKAYSKL 
       110        120        130        140        150
GFADLNLAEF AGSGSTVRCC LLEGYDTKNT RQDNSILKVT IGMFLLSGDP 
       160        170        180        190        200
CFKTPPSTAK SISIPGQDSS LQLTCKGGGT SSGGSSTNSL TGSRPPKARP 
       210        220        230        240        250
TILSSGLPEE PDQNLSSPEE VFHSGHSRNS SYASQQSKIS GYSTEHSRSS 
       260        270        280        290        300
SLSDLTHRRN TSTSSSASGG LGMTVEGPEG SEREHRPPEK PPRPPRPLHL 
       310        320        330        340        350
SDRSFRRKKD SVESHPTWVD DTRIDADAIV EKIVQSQDFT DGSNTEDSNL 
       360        370        380 
RLFVSRDGSA TLSGIQLATR VSSGVYEPVV IESH
Length:384
Mass (Da):41,785
Last modified:November 28, 2006 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i330218BC18A0EA8C
GO
Isoform 2 (identifier: Q5T9C2-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     371-384: Missing.

Show »
Length:370
Mass (Da):40,301
Checksum:iF7B3C15AF6E5C176
GO
Isoform 3 (identifier: Q5T9C2-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-142: Missing.

Show »
Length:242
Mass (Da):25,893
Checksum:iBAF4393DEC3EA2EC
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0438571 – 142Missing in isoform 3. 1 PublicationAdd BLAST142
Alternative sequenceiVSP_021744371 – 384Missing in isoform 2. 1 PublicationAdd BLAST14

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AL157935 Genomic DNA No translation available.
BC137087 mRNA Translation: AAI37088.1
BC137088 mRNA Translation: AAI37089.1
AK074108 mRNA Translation: BAB84934.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS35150.1 [Q5T9C2-1]
CCDS6888.1 [Q5T9C2-3]

NCBI Reference Sequences

More...RefSeqi		NP_001030331.1, NM_001035254.2 [Q5T9C2-1]
NP_976050.1, NM_203305.2 [Q5T9C2-3]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000373084; ENSP00000362176; ENSG00000167106 [Q5T9C2-3]
ENST00000373095; ENSP00000362187; ENSG00000167106 [Q5T9C2-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		399665

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:399665

UCSC genome browser

More...UCSCi		uc004bsw.2 human [Q5T9C2-1]

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL157935 Genomic DNA No translation available.
BC137087 mRNA Translation: AAI37088.1
BC137088 mRNA Translation: AAI37089.1
AK074108 mRNA Translation: BAB84934.1
CCDSiCCDS35150.1 [Q5T9C2-1]
CCDS6888.1 [Q5T9C2-3]
RefSeqiNP_001030331.1, NM_001035254.2 [Q5T9C2-1]
NP_976050.1, NM_203305.2 [Q5T9C2-3]

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

BioGridi134377, 6 interactors
IntActiQ5T9C2, 11 interactors
STRINGi9606.ENSP00000362187

PTM databases

iPTMnetiQ5T9C2
PhosphoSitePlusiQ5T9C2

Polymorphism and mutation databases

BioMutaiFAM102A
DMDMi118572304

Proteomic databases

jPOSTiQ5T9C2
MassIVEiQ5T9C2
MaxQBiQ5T9C2
PaxDbiQ5T9C2
PeptideAtlasiQ5T9C2
PRIDEiQ5T9C2
ProteomicsDBi64787 [Q5T9C2-1]
64788 [Q5T9C2-2]
64789 [Q5T9C2-3]

Genome annotation databases

EnsembliENST00000373084; ENSP00000362176; ENSG00000167106 [Q5T9C2-3]
ENST00000373095; ENSP00000362187; ENSG00000167106 [Q5T9C2-1]
GeneIDi399665
KEGGihsa:399665
UCSCiuc004bsw.2 human [Q5T9C2-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		399665
DisGeNETi399665
EuPathDBiHostDB:ENSG00000167106.11

GeneCards: human genes, protein and diseases

More...GeneCardsi		FAM102A
HGNCiHGNC:31419 FAM102A
HPAiHPA036030
MIMi610891 gene
neXtProtiNX_Q5T9C2
OpenTargetsiENSG00000167106
PharmGKBiPA142671784

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiENOG410IWVB Eukaryota
ENOG4110G47 LUCA
GeneTreeiENSGT00940000156811
HOGENOMiHOG000230902
InParanoidiQ5T9C2
OMAiGGYEPVV
OrthoDBi725501at2759
PhylomeDBiQ5T9C2
TreeFamiTF320966

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		FAM102A human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		399665
PharosiQ5T9C2 Tdark

Protein Ontology

More...PROi		PR:Q5T9C2
RNActiQ5T9C2 protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000167106 Expressed in 223 organ(s), highest expression level in islet of Langerhans
GenevisibleiQ5T9C2 HS

Family and domain databases

InterProiView protein in InterPro
IPR039931 FAM102-like
IPR019448 NT-C2
PANTHERiPTHR21456 PTHR21456, 1 hit
PfamiView protein in Pfam
PF10358 NT-C2, 1 hit
PROSITEiView protein in PROSITE
PS51840 C2_NT, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiF102A_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q5T9C2
Secondary accession number(s): A2A329, Q8TEL4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 28, 2006
Last modified: December 11, 2019
This is version 117 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
  3. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
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