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Protein
Submitted name:

Proline/serine-rich coiled-coil protein 1

Gene

PSRC1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Proline/serine-rich coiled-coil protein 1Imported
Gene namesi
Name:PSRC1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

EuPathDBiHostDB:ENSG00000134222.16
HGNCiHGNC:24472 PSRC1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000134222

PTM / Processingi

Proteomic databases

MaxQBiQ5T2Z0
PeptideAtlasiQ5T2Z0
PRIDEiQ5T2Z0

Expressioni

Gene expression databases

BgeeiENSG00000134222 Expressed in 173 organ(s), highest expression level in C1 segment of cervical spinal cord
ExpressionAtlasiQ5T2Z0 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliQ5T2Z0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 97GTSE1_NInterPro annotationAdd BLAST89

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili74 – 94Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IEJI Eukaryota
ENOG410Z01V LUCA
GeneTreeiENSGT00510000048604
HOGENOMiHOG000231348
HOVERGENiHBG080237

Family and domain databases

InterProiView protein in InterPro
IPR026658 DDA3
IPR026657 DDA3/GTSE-1
IPR032768 GTSE1_N
PANTHERiPTHR21584 PTHR21584, 1 hit
PTHR21584:SF1 PTHR21584:SF1, 1 hit
PfamiView protein in Pfam
PF15259 GTSE1_N, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

Q5T2Z0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDLEEDVRF IVDETLDFGG LSPSDSREEE DITVLVTPEK PLRRGLSHRS
60 70 80 90 100
DPNAVAPAPQ GVRLSLGPLS PEKLEEILDE ANRLAAQLEQ CALQDRESAG
110 120 130 140 150
EGLGPRRVKP SPRRETFVLK DSPVRDLLPT VNSLTRSTPS PSSLTPRLRS
160 170 180 190 200
NDRKGSVRAL RATSGKRPSN MKRESPTCNL FPASKSPASS PLTRSTPPVR

GRAGP
Length:205
Mass (Da):22,334
Last modified:September 18, 2013 - v2
Checksum:iBE8F2FBFC815E63F
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q6PGN9PSRC1_HUMAN
Proline/serine-rich coiled-coil pro...
PSRC1 DDA3, FP3214
363Annotation score:
Q5T2Z1Q5T2Z1_HUMAN
Proline/serine-rich coiled-coil pro...
PSRC1
231Annotation score:
S4R3S8S4R3S8_HUMAN
Proline/serine-rich coiled-coil pro...
PSRC1
122Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei205Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL390252 Genomic DNA No translation available.
KF459601 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000418914; ENSP00000413186; ENSG00000134222
UCSCiuc057iyj.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL390252 Genomic DNA No translation available.
KF459601 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliQ5T2Z0
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiQ5T2Z0
PeptideAtlasiQ5T2Z0
PRIDEiQ5T2Z0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000418914; ENSP00000413186; ENSG00000134222
UCSCiuc057iyj.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000134222.16
HGNCiHGNC:24472 PSRC1
OpenTargetsiENSG00000134222
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IEJI Eukaryota
ENOG410Z01V LUCA
GeneTreeiENSGT00510000048604
HOGENOMiHOG000231348
HOVERGENiHBG080237

Miscellaneous databases

ChiTaRSiPSRC1 human

Gene expression databases

BgeeiENSG00000134222 Expressed in 173 organ(s), highest expression level in C1 segment of cervical spinal cord
ExpressionAtlasiQ5T2Z0 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR026658 DDA3
IPR026657 DDA3/GTSE-1
IPR032768 GTSE1_N
PANTHERiPTHR21584 PTHR21584, 1 hit
PTHR21584:SF1 PTHR21584:SF1, 1 hit
PfamiView protein in Pfam
PF15259 GTSE1_N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ5T2Z0_HUMAN
AccessioniPrimary (citable) accession number: Q5T2Z0
Entry historyiIntegrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: September 18, 2013
Last modified: September 12, 2018
This is version 96 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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