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Protein
Submitted name:

MCG23028

Gene

Zkscan4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-MMU-212436 Generic Transcription Pathway

Names & Taxonomyi

Protein namesi
Submitted name:
MCG23028Imported
Submitted name:
Zinc finger with KRAB and SCAN domains 4Imported
Gene namesi
Name:Zkscan4Imported
ORF Names:mCG_23028Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 13

Organism-specific databases

MGIiMGI:3649412 Zkscan4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000054931 Expressed in 115 organ(s), highest expression level in ear vesicle

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000054604

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini51 – 133SCAN boxInterPro annotationAdd BLAST83
Domaini253 – 280C2H2-typeInterPro annotationAdd BLAST28
Domaini281 – 308C2H2-typeInterPro annotationAdd BLAST28
Domaini309 – 336C2H2-typeInterPro annotationAdd BLAST28
Domaini337 – 364C2H2-typeInterPro annotationAdd BLAST28
Domaini365 – 392C2H2-typeInterPro annotationAdd BLAST28
Domaini420 – 447C2H2-typeInterPro annotationAdd BLAST28
Domaini448 – 475C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118881
HOGENOMiHOG000234619
HOVERGENiHBG018163
KOiK09230
OMAiNRRHYCH
OrthoDBiEOG091G040B
TreeFamiTF350830

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
PF00096 zf-C2H2, 7 hits
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 7 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 7 hits
PS50157 ZINC_FINGER_C2H2_2, 7 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q5SZT6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAREPGTSAA LNARSAEEGT GLLVVKVEQE EASPLAEETS WLGSPGPDRS
60 70 80 90 100
RQRFRAFRYP EAAGPRQALS RLRELCRQWL RPDMHSKEQI LELLVLEQFL
110 120 130 140 150
TILPGELQTW VREQHPDSGE EVVALLEYLD RQLDDTPPQV STGEWSRELL
160 170 180 190 200
CCKVAVVTPS QDSQSSHCQA MKSLFKHESQ ESLECSPLQA RGLEMKPETR
210 220 230 240 250
DLPRAEEYRD QKPEQTVCFL GEDTVPIPTG AEASEQEGKL QTAQKSATGT
260 270 280 290 300
RRHFCCECGK SFAQSSGLTK HKRIHTGEKP YECEDCGKTF IGSSALVIHQ
310 320 330 340 350
RVHTGEKPYE CEECGKVFSH SSNLIKHQRT HTGEKPYECD DCGKTFTQSC
360 370 380 390 400
SLLEHHKIHT GEKPFQCNLC GKAFRRSSHL LRHQRIHGDK TAPKPLHGEA
410 420 430 440 450
WEGQSPVAGQ GEDVEAPETY QCSECERSFT RRRSLLEHKK IHTGEKPYQC
460 470 480
DACGKGFTRT SYLAQHQRSH VGKKLSHSDL
Length:480
Mass (Da):54,069
Last modified:December 21, 2004 - v1
Checksum:iF7F2084A58EC4E53
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A286YD55A0A286YD55_MOUSE
Zinc finger with KRAB and SCAN doma...
Zkscan4
451Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL589742 Genomic DNA No translation available.
CH466561 Genomic DNA Translation: EDL32649.1
RefSeqiNP_001034204.1, NM_001039115.2
UniGeneiMm.441300

Genome annotation databases

EnsembliENSMUST00000062609; ENSMUSP00000054604; ENSMUSG00000054931
GeneIDi544922
KEGGimmu:544922
UCSCiuc007pqn.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL589742 Genomic DNA No translation available.
CH466561 Genomic DNA Translation: EDL32649.1
RefSeqiNP_001034204.1, NM_001039115.2
UniGeneiMm.441300

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000054604

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000062609; ENSMUSP00000054604; ENSMUSG00000054931
GeneIDi544922
KEGGimmu:544922
UCSCiuc007pqn.2 mouse

Organism-specific databases

CTDi387032
MGIiMGI:3649412 Zkscan4

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118881
HOGENOMiHOG000234619
HOVERGENiHBG018163
KOiK09230
OMAiNRRHYCH
OrthoDBiEOG091G040B
TreeFamiTF350830

Enzyme and pathway databases

ReactomeiR-MMU-212436 Generic Transcription Pathway

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000054931 Expressed in 115 organ(s), highest expression level in ear vesicle

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
PF00096 zf-C2H2, 7 hits
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SM00355 ZnF_C2H2, 7 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 7 hits
PS50157 ZINC_FINGER_C2H2_2, 7 hits
ProtoNetiSearch...

Entry informationi

Entry nameiQ5SZT6_MOUSE
AccessioniPrimary (citable) accession number: Q5SZT6
Entry historyiIntegrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: November 7, 2018
This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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