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Entry version 116 (29 Sep 2021)
Sequence version 1 (21 Dec 2004)
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Protein

Echinoderm microtubule-associated protein-like 6

Gene

Eml6

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May modify the assembly dynamics of microtubules, such that microtubules are slightly longer, but more dynamic.

By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • microtubule binding Source: GO_Central

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Echinoderm microtubule-associated protein-like 6
Short name:
EMAP-6
Alternative name(s):
Echinoderm microtubule-associated protein-like 5-like
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Eml6
Synonyms:Eml5l
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 11

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2442895, Eml6

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSMUSG00000044072

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm, Cytoskeleton, Microtubule

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002843981 – 1958Echinoderm microtubule-associated protein-like 6Add BLAST1958

Proteomic databases

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q5SQM0

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q5SQM0

PRoteomics IDEntifications database

More...
PRIDEi
Q5SQM0

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
277582

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q5SQM0

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q5SQM0

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q5SQM0

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000044072, Expressed in diencephalon and 156 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q5SQM0, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q5SQM0, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
231896, 1 interactor

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000051080

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q5SQM0, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q5SQM0

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati59 – 100WD 1Add BLAST42
Repeati104 – 145WD 2Add BLAST42
Repeati148 – 187WD 3Add BLAST40
Repeati195 – 233WD 4Add BLAST39
Repeati235 – 273WD 5Add BLAST39
Repeati280 – 321WD 6Add BLAST42
Repeati323 – 362WD 7Add BLAST40
Repeati364 – 403WD 8Add BLAST40
Repeati406 – 445WD 9Add BLAST40
Repeati561 – 601WD 10Add BLAST41
Repeati725 – 766WD 11Add BLAST42
Repeati770 – 811WD 12Add BLAST42
Repeati814 – 853WD 13Add BLAST40
Repeati861 – 900WD 14Add BLAST40
Repeati901 – 940WD 15Add BLAST40
Repeati996 – 1035WD 16Add BLAST40
Repeati1038 – 1077WD 17Add BLAST40
Repeati1080 – 1120WD 18Add BLAST41
Repeati1191 – 1230WD 19Add BLAST40
Repeati1236 – 1276WD 20Add BLAST41
Repeati1412 – 1456WD 21Add BLAST45
Repeati1460 – 1501WD 22Add BLAST42
Repeati1504 – 1543WD 23Add BLAST40
Repeati1553 – 1591WD 24Add BLAST39
Repeati1593 – 1638WD 25Add BLAST46
Repeati1685 – 1724WD 26Add BLAST40
Repeati1726 – 1767WD 27Add BLAST42
Repeati1768 – 1807WD 28Add BLAST40
Repeati1880 – 1919WD 29Add BLAST40
Repeati1925 – 1958WD 30Add BLAST34

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni604 – 627DisorderedSequence analysisAdd BLAST24
Regioni1322 – 1352DisorderedSequence analysisAdd BLAST31

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the WD repeat EMAP family.Curated

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG2106, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155564

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_001930_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q5SQM0

Identification of Orthologs from Complete Genome Data

More...
OMAi
IGDMTEF

Database of Orthologous Groups

More...
OrthoDBi
97584at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q5SQM0

TreeFam database of animal gene trees

More...
TreeFami
TF317832

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.130.10.10, 6 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR024977, Apc4_WD40_dom
IPR005108, HELP
IPR011047, Quinoprotein_ADH-like_supfam
IPR015943, WD40/YVTN_repeat-like_dom_sf
IPR001680, WD40_repeat
IPR036322, WD40_repeat_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12894, ANAPC4_WD40, 2 hits
PF03451, HELP, 3 hits
PF00400, WD40, 10 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00320, WD40, 30 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50978, SSF50978, 4 hits
SSF50998, SSF50998, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00678, WD_REPEATS_1, 1 hit
PS50082, WD_REPEATS_2, 7 hits
PS50294, WD_REPEATS_REGION, 6 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q5SQM0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MADRTAPRCQ LRLEWVYGYR GHQCRNNLYY TAGKEVVYFV AGVGVVYNTR
60 70 80 90 100
EHSQKFFLGH NDDIISLALH PDKTLIATGQ VGKEPYICIW NSYNVHTVSI
110 120 130 140 150
LKDVHTHGVA CLAFDSDGQH LASVGLDAKN TVCIWDWRKG KLLASATGHS
160 170 180 190 200
DRIFDISWDP YQPNRMVSCG VKHIKFWTLC GNALTAKRGI FGKTGDLQTI
210 220 230 240 250
LCLACAKEDI TYSGALNGDI YVWKGLTLVR TIQGAHSAGI FSLYACEEGF
260 270 280 290 300
ATGGRDGCIR LWDTDFKPIT KIDLRETEQG YKGLSIRSVC WKADRLLAGT
310 320 330 340 350
QDSEIFEVIV RERDKPMLIL QGHCEGELWA LALHPKKPLA VTGSDDRSVR
360 370 380 390 400
LWSLADHALI ARCNMEEAVR SVSFSPDGSQ LALGMKDGSF IVLRVRDMTE
410 420 430 440 450
VVHIKDRKEV IHEMKFSPDG SYLAVGSNDG PVDVYAVAQR YKKIGECNKS
460 470 480 490 500
LSFITHIDWS LDSKYLQTND GAGERLFYKM PSGKPLTSKE EIKGIPWASW
510 520 530 540 550
TCVRGPEVSG IWPKYTEVID INSVDANYNS SVLVSGDDFG LVKLFKFPCL
560 570 580 590 600
KKGAKFRKYV GHSAHVTNVR WSHDFQWVLS TGGADHSVFQ WRFIPEAVSN
610 620 630 640 650
GVLETTPQEG GADSYSEESD SDFSDVPELD SDIEQETQIN YDRQVYKEDL
660 670 680 690 700
PQLKQQSKEK NHAVPFLKRE KAPEDSLKLQ FIHGYRGYDC RNNLFYTQAG
710 720 730 740 750
EVVYHIAAVA VVYNRQQHAQ RLYLGHDDDI LSLTIHPVKD YVATGQVGRD
760 770 780 790 800
AAVHVWDTQT LKCLSLLKGH HQRGVCALDF SADGKCLVSV GLDDFHSVVF
810 820 830 840 850
WDWKKGEKIA TTRGHKDKIF VVKCNPQHAD KLVTVGIKHI KFWQQAGGGF
860 870 880 890 900
TSKRGSFGSA GKLETMMCVS YGRMEDLVFS GAATGDIFIW KDVLLLKTVK
910 920 930 940 950
AHDGPVFAMY ALDKGFVTGG KDGIVELWDD MFERCLKTYA IKRTALSTSS
960 970 980 990 1000
KGLLLEDNPS IRAITLGHGH ILVGTKNGEI LEIDKSGPMT LLVQGHMEGE
1010 1020 1030 1040 1050
VWGLAAHPLL PICATVSDDK TLRIWELSSQ HRMLAVRKLK KGGRCCAFSP
1060 1070 1080 1090 1100
DGKALAVGLN DGSFLVVNAD TVEDMLSFHH RKEMISDIKF SKDTGKYLAV
1110 1120 1130 1140 1150
ASHDNFVDIY NVLTSKRVGI CKGASSYITH IDWDSRGKLL QVNSGAKEQL
1160 1170 1180 1190 1200
FFEAPRGRKH TIRPSEAEKI EWDTWTCVLG PTCEGIWPAH SDVTDVNAAN
1210 1220 1230 1240 1250
LTKDGSLLAT GDDFGFVKLF SYPVKGQHAR FKKYVGHSAH VTNVRWLHND
1260 1270 1280 1290 1300
SVLLTVGGAD TALMIWTREF VGTQESKLVD SEESDTDAEE DGGYDSDVAR
1310 1320 1330 1340 1350
EKAIDYTTKI YAVSIREMEG TKPHQQLKEV SMEERPPVSR AAPQPEKLQK
1360 1370 1380 1390 1400
NNITKKKKLV EELALDHVFG YRGFDCRNNL HYLNDGADII FHTAAAGIVQ
1410 1420 1430 1440 1450
NLSTGSQSFY LEHTDDILCL TVNQHPKYRN VVATSQIGTT PSIHIWDAMT
1460 1470 1480 1490 1500
KHTLSMLRCF HTKGVNYINF SATGKLLVSV GVDPEHTITV WRWQEGTKVA
1510 1520 1530 1540 1550
SRGGHLERIF VVEFRPDSDT QFVSVGVKHM KFWTLAGSAL LYKKGVIGSM
1560 1570 1580 1590 1600
EAAKMQTMLS VAFGANNLTF TGAINGDVYV WKEHFLIRLV AKAHTGPVFT
1610 1620 1630 1640 1650
MYTTLRDGLI VTGGKERPTK EGGAVKLWDQ EMKRCRAFQL ETGQLVECVR
1660 1670 1680 1690 1700
SVCRGKGKIL VGTKDGEIIE VGEKSAASNI LIDGHMEGEI WGLATHPSKD
1710 1720 1730 1740 1750
MFISASNDGT ARIWDLADKK LLNKVNLGHA ARCAAYSPDG EMVAIGMKNG
1760 1770 1780 1790 1800
EFVILLVNTL KVWGKKRDRK SAIQDIRISP DNRFLAVGSS EQTVDFYDLT
1810 1820 1830 1840 1850
QGTSLNRIGY CKDIPSFVIQ MDFSADSKYI QVSTGAYKRQ VHEVPLGKQV
1860 1870 1880 1890 1900
TEAMVVEKIT WASWTSVLGD EVIGIWPRNA DKADVNCACV THAGLNIVTG
1910 1920 1930 1940 1950
DDFGLLKLFD FPCTEKFAKH KRYFGHSAHV TNIRFSSDDK YVVSTGGDDC

SVFVWRCL
Length:1,958
Mass (Da):217,941
Last modified:December 21, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i89CFE27D378AA656
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F6QY72F6QY72_MOUSE
Echinoderm microtubule-associated p...
Eml6
83Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6ZBI5F6ZBI5_MOUSE
Echinoderm microtubule-associated p...
Eml6
88Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH24726 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAC38214 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti1890V → M in BAC38214 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL731792 Genomic DNA No translation available.
AL929371 Genomic DNA No translation available.
BX005100 Genomic DNA No translation available.
AK049977 mRNA Translation: BAC34015.1
AK081418 mRNA Translation: BAC38214.1 Different initiation.
BC024726 mRNA Translation: AAH24726.1 Different initiation.

NCBI Reference Sequences

More...
RefSeqi
NP_666128.2, NM_146016.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000058902; ENSMUSP00000051080; ENSMUSG00000044072

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
237711

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:237711

UCSC genome browser

More...
UCSCi
uc007ihq.1, mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL731792 Genomic DNA No translation available.
AL929371 Genomic DNA No translation available.
BX005100 Genomic DNA No translation available.
AK049977 mRNA Translation: BAC34015.1
AK081418 mRNA Translation: BAC38214.1 Different initiation.
BC024726 mRNA Translation: AAH24726.1 Different initiation.
RefSeqiNP_666128.2, NM_146016.2

3D structure databases

SMRiQ5SQM0
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi231896, 1 interactor
STRINGi10090.ENSMUSP00000051080

PTM databases

iPTMnetiQ5SQM0
PhosphoSitePlusiQ5SQM0
SwissPalmiQ5SQM0

Proteomic databases

MaxQBiQ5SQM0
PaxDbiQ5SQM0
PRIDEiQ5SQM0
ProteomicsDBi277582

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
74753, 8 antibodies

The DNASU plasmid repository

More...
DNASUi
237711

Genome annotation databases

EnsembliENSMUST00000058902; ENSMUSP00000051080; ENSMUSG00000044072
GeneIDi237711
KEGGimmu:237711
UCSCiuc007ihq.1, mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
400954
MGIiMGI:2442895, Eml6
VEuPathDBiHostDB:ENSMUSG00000044072

Phylogenomic databases

eggNOGiKOG2106, Eukaryota
GeneTreeiENSGT00940000155564
HOGENOMiCLU_001930_0_0_1
InParanoidiQ5SQM0
OMAiIGDMTEF
OrthoDBi97584at2759
PhylomeDBiQ5SQM0
TreeFamiTF317832

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
237711, 0 hits in 58 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Eml6, mouse

Protein Ontology

More...
PROi
PR:Q5SQM0
RNActiQ5SQM0, protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000044072, Expressed in diencephalon and 156 other tissues
ExpressionAtlasiQ5SQM0, baseline and differential
GenevisibleiQ5SQM0, MM

Family and domain databases

Gene3Di2.130.10.10, 6 hits
InterProiView protein in InterPro
IPR024977, Apc4_WD40_dom
IPR005108, HELP
IPR011047, Quinoprotein_ADH-like_supfam
IPR015943, WD40/YVTN_repeat-like_dom_sf
IPR001680, WD40_repeat
IPR036322, WD40_repeat_dom_sf
PfamiView protein in Pfam
PF12894, ANAPC4_WD40, 2 hits
PF03451, HELP, 3 hits
PF00400, WD40, 10 hits
SMARTiView protein in SMART
SM00320, WD40, 30 hits
SUPFAMiSSF50978, SSF50978, 4 hits
SSF50998, SSF50998, 2 hits
PROSITEiView protein in PROSITE
PS00678, WD_REPEATS_1, 1 hit
PS50082, WD_REPEATS_2, 7 hits
PS50294, WD_REPEATS_REGION, 6 hits

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiEMAL6_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q5SQM0
Secondary accession number(s): Q8C4R3, Q8C7L3, Q8R1E3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: December 21, 2004
Last modified: September 29, 2021
This is version 116 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
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