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Protein

30S ribosomal protein S16

Gene

rpsP

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the lower part of the body of the 30S subunit, where it stabilizes two of its domains.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-1042-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S16UniRule annotation
Gene namesi
Name:rpsPUniRule annotation
Ordered Locus Names:TTHA1035
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Pathology & Biotechi

Chemistry databases

DrugBankiDB08185 2-METHYLTHIO-N6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001672691 – 8830S ribosomal protein S16Add BLAST88

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.

Protein-protein interaction databases

STRINGi300852.TTHA1035

Structurei

Secondary structure

188
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 8Combined sources7
Beta strandi17 – 23Combined sources7
Beta strandi28 – 30Combined sources3
Beta strandi33 – 39Combined sources7
Beta strandi49 – 51Combined sources3
Helixi53 – 60Combined sources8
Turni61 – 63Combined sources3
Beta strandi64 – 66Combined sources3
Helixi68 – 76Combined sources9
Turni77 – 80Combined sources4

3D structure databases

ProteinModelPortaliQ5SJH3
SMRiQ5SJH3
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SJH3

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS16 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5M Bacteria
COG0228 LUCA
HOGENOMiHOG000246720
KOiK02959
OMAiRARYWIG
PhylomeDBiQ5SJH3

Family and domain databases

Gene3Di3.30.1320.10, 1 hit
HAMAPiMF_00385 Ribosomal_S16, 1 hit
InterProiView protein in InterPro
IPR000307 Ribosomal_S16
IPR023803 Ribosomal_S16_dom_sf
PANTHERiPTHR12919 PTHR12919, 1 hit
PfamiView protein in Pfam
PF00886 Ribosomal_S16, 1 hit
SUPFAMiSSF54565 SSF54565, 1 hit
TIGRFAMsiTIGR00002 S16, 1 hit

Sequencei

Sequence statusi: Complete.

Q5SJH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKIRLARFG SKHNPHYRIV VTDARRKRDG KYIEKIGYYD PRKTTPDWLK
60 70 80
VDVERARYWL SVGAQPTDTA RRLLRQAGVF RQEAREGA
Length:88
Mass (Da):10,387
Last modified:December 21, 2004 - v1
Checksum:iF8E45F06816EA96F
GO

Mass spectrometryi

Molecular mass is 10387 Da from positions 1 - 88. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD70858.1
RefSeqiWP_011173115.1, NC_006461.1
YP_144301.1, NC_006461.1

Genome annotation databases

EnsemblBacteriaiBAD70858; BAD70858; BAD70858
GeneIDi3170114
KEGGittj:TTHA1035
PATRICifig|300852.9.peg.1015

Similar proteinsi

Entry informationi

Entry nameiRS16_THET8
AccessioniPrimary (citable) accession number: Q5SJH3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: December 21, 2004
Last modified: June 20, 2018
This is version 126 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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