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UniProtKB - Q5SHR2 (RL36_THET8)
Protein
50S ribosomal protein L36
Gene
rpmJ
Organism
Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Status
Functioni
Cofactori
Zn2+By similarityNote: Binds 1 zinc ion per subunit.By similarity
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 11 | ZincBy similarity | 1 | |
Metal bindingi | 14 | ZincBy similarity | 1 | |
Metal bindingi | 27 | ZincBy similarity | 1 | |
Metal bindingi | 32 | ZincBy similarity | 1 |
GO - Molecular functioni
- metal ion binding Source: UniProtKB-KW
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein |
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L36Alternative name(s): Ribosomal protein B |
Gene namesi | Name:rpmJ Ordered Locus Names:TTHA1668 |
Organismi | Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) |
Taxonomic identifieri | 300852 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000126284 | 1 – 37 | 50S ribosomal protein L36Add BLAST | 37 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit.
Protein-protein interaction databases
IntActi | Q5SHR2, 8 interactors |
STRINGi | 300852.55773050 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q5SHR2 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q5SHR2 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL36 family.Curated
Phylogenomic databases
eggNOGi | COG0257, Bacteria |
HOGENOMi | CLU_135723_6_2_0 |
PhylomeDBi | Q5SHR2 |
Family and domain databases
HAMAPi | MF_00251, Ribosomal_L36, 1 hit |
InterProi | View protein in InterPro IPR000473, Ribosomal_L36 IPR035977, Ribosomal_L36_sp |
PANTHERi | PTHR42888, PTHR42888, 1 hit |
Pfami | View protein in Pfam PF00444, Ribosomal_L36, 1 hit |
SUPFAMi | SSF57840, SSF57840, 1 hit |
TIGRFAMsi | TIGR01022, rpmJ_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00828, RIBOSOMAL_L36, 1 hit |
i Sequence
Sequence statusi: Complete.
Mass spectrometryi
Molecular mass is 4422 Da. Determined by MALDI. 1 Publication
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB024328 Genomic DNA Translation: BAA75545.1 AP008226 Genomic DNA Translation: BAD71491.1 |
RefSeqi | WP_008633370.1, NC_006461.1 YP_144934.1, NC_006461.1 |
Genome annotation databases
EnsemblBacteriai | BAD71491; BAD71491; BAD71491 |
GeneIDi | 3167970 |
KEGGi | ttj:TTHA1668 |
PATRICi | fig|300852.9.peg.1638 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB024328 Genomic DNA Translation: BAA75545.1 AP008226 Genomic DNA Translation: BAD71491.1 |
RefSeqi | WP_008633370.1, NC_006461.1 YP_144934.1, NC_006461.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1VY4 | X-ray | 2.60 | B9/D9 | 1-37 | [»] | |
1VY5 | X-ray | 2.55 | B9/D9 | 1-37 | [»] | |
1VY6 | X-ray | 2.90 | B9/D9 | 1-37 | [»] | |
1VY7 | X-ray | 2.80 | B9/D9 | 1-37 | [»] | |
4P6F | X-ray | 3.60 | R9/Y9 | 1-37 | [»] | |
4P70 | X-ray | 3.68 | R9/Y9 | 1-37 | [»] | |
4TUA | X-ray | 3.60 | R9/Y9 | 1-37 | [»] | |
4TUB | X-ray | 3.60 | R9/Y9 | 1-37 | [»] | |
4TUC | X-ray | 3.60 | R9/Y9 | 1-37 | [»] | |
4TUD | X-ray | 3.60 | R9/Y9 | 1-37 | [»] | |
4TUE | X-ray | 3.50 | R9/Y9 | 1-37 | [»] | |
4V4P | X-ray | 5.50 | 9 | 11-36 | [»] | |
4V4X | X-ray | 5.00 | B8 | 1-37 | [»] | |
4V4Y | X-ray | 5.50 | B8 | 1-37 | [»] | |
4V4Z | X-ray | 4.51 | B8 | 1-37 | [»] | |
4V51 | X-ray | 2.80 | 9 | 1-37 | [»] | |
4V5C | X-ray | 3.30 | B9/D9 | 1-37 | [»] | |
4V5D | X-ray | 3.50 | B9/D9 | 1-37 | [»] | |
4V5E | X-ray | 3.45 | B9/D9 | 1-37 | [»] | |
4V5F | X-ray | 3.60 | B9/D9 | 1-37 | [»] | |
4V5G | X-ray | 3.60 | B9/D9 | 1-37 | [»] | |
4V5J | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4V5K | X-ray | 3.20 | B9/D9 | 1-37 | [»] | |
4V5L | X-ray | 3.10 | B9 | 1-37 | [»] | |
4V5M | electron microscopy | 7.80 | B9 | 1-37 | [»] | |
4V5N | electron microscopy | 7.60 | B9 | 1-37 | [»] | |
4V5P | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4V5Q | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4V5R | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4V5S | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4V68 | electron microscopy | 6.40 | B9 | 2-36 | [»] | |
4V6A | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4V7J | X-ray | 3.30 | A9/B9 | 1-37 | [»] | |
4V7K | X-ray | 3.60 | A9/B9 | 1-37 | [»] | |
4V7L | X-ray | 3.00 | B9/D9 | 1-37 | [»] | |
4V7M | X-ray | 3.45 | B9/D9 | 1-37 | [»] | |
4V8G | X-ray | 3.00 | B9/D9 | 1-37 | [»] | |
4V8H | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4V8I | X-ray | 2.70 | B9/D9 | 1-37 | [»] | |
4V8J | X-ray | 3.90 | B9/D9 | 1-37 | [»] | |
4V8N | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4V8O | X-ray | 3.80 | B9 | 1-37 | [»] | |
4V8Q | X-ray | 3.10 | A9 | 1-37 | [»] | |
4V8U | X-ray | 3.70 | B9/D9 | 1-37 | [»] | |
4V8X | X-ray | 3.35 | B9/D9 | 1-37 | [»] | |
4V90 | X-ray | 2.95 | B9 | 1-37 | [»] | |
4V95 | X-ray | 3.20 | B9/D9 | 1-37 | [»] | |
4V97 | X-ray | 3.52 | B9/D9 | 1-37 | [»] | |
4V9H | X-ray | 2.86 | B9 | 1-37 | [»] | |
4V9I | X-ray | 3.30 | B9/D9 | 2-37 | [»] | |
4V9R | X-ray | 3.00 | B9/D9 | 1-37 | [»] | |
4V9S | X-ray | 3.10 | B9/D9 | 1-37 | [»] | |
4W2E | X-ray | 2.90 | 9 | 1-37 | [»] | |
4W2F | X-ray | 2.40 | B9/D9 | 1-37 | [»] | |
4W2G | X-ray | 2.55 | B9/D9 | 1-37 | [»] | |
4W2H | X-ray | 2.70 | B9/D9 | 1-37 | [»] | |
4W2I | X-ray | 2.70 | B9/D9 | 1-37 | [»] | |
4W4G | X-ray | 3.30 | R9/Y9 | 1-37 | [»] | |
4WPO | X-ray | 2.80 | A9/C9 | 1-37 | [»] | |
4WQF | X-ray | 2.80 | A9/C9 | 1-37 | [»] | |
4WQU | X-ray | 2.80 | A9/C9 | 1-37 | [»] | |
4WQY | X-ray | 2.80 | A9/C9 | 1-37 | [»] | |
4WT8 | X-ray | 3.40 | C0/D0 | 2-37 | [»] | |
4Y4O | X-ray | 2.30 | 19/29 | 1-37 | [»] | |
4Y4P | X-ray | 2.50 | 19/29 | 1-37 | [»] | |
4YPB | X-ray | 3.40 | R9/Y9 | 1-37 | [»] | |
4YZV | X-ray | 3.10 | R9/Y9 | 1-37 | [»] | |
4Z3S | X-ray | 2.65 | 19/29 | 1-37 | [»] | |
4Z8C | X-ray | 2.90 | 19/29 | 1-37 | [»] | |
4ZER | X-ray | 3.10 | 19/29 | 1-37 | [»] | |
4ZSN | X-ray | 3.60 | R9/Y9 | 1-37 | [»] | |
5A9Z | electron microscopy | 4.70 | Af | 1-37 | [»] | |
5AA0 | electron microscopy | 5.00 | Af | 1-37 | [»] | |
5CZP | X-ray | 3.30 | R9/Y9 | 1-37 | [»] | |
5DFE | X-ray | 3.10 | R9/Y9 | 1-37 | [»] | |
5DOX | X-ray | 3.10 | 19/29 | 1-37 | [»] | |
5DOY | X-ray | 2.60 | 19/29 | 1-37 | [»] | |
5F8K | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
5FDU | X-ray | 2.90 | 19/29 | 1-37 | [»] | |
5FDV | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
5HAU | X-ray | 3.00 | 17/27 | 1-37 | [»] | |
5HCP | X-ray | 2.89 | 19/29 | 1-37 | [»] | |
5HCQ | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
5HCR | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
5HD1 | X-ray | 2.70 | 19/29 | 1-37 | [»] | |
5IMQ | electron microscopy | 3.80 | 1 | 1-37 | [»] | |
5IMR | electron microscopy | - | 1 | 1-37 | [»] | |
5J30 | X-ray | 3.20 | R9/Y9 | 1-37 | [»] | |
5J3C | X-ray | 3.04 | R9/Y9 | 1-37 | [»] | |
5J4B | X-ray | 2.60 | 19/29 | 1-37 | [»] | |
5J4C | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
5J8B | X-ray | 2.60 | 9 | 1-37 | [»] | |
5OT7 | electron microscopy | 3.80 | e | 1-37 | [»] | |
5UQ7 | electron microscopy | 3.50 | 9 | 1-37 | [»] | |
5UQ8 | electron microscopy | 3.20 | 9 | 1-37 | [»] | |
5VP2 | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
5VPO | X-ray | 3.34 | R9/Y9 | 1-37 | [»] | |
5VPP | X-ray | 3.90 | R9/Y9 | 1-37 | [»] | |
5W4K | X-ray | 2.70 | 19/29 | 1-37 | [»] | |
5WIS | X-ray | 2.70 | 19/29 | 1-37 | [»] | |
5WIT | X-ray | 2.60 | 19/29 | 1-37 | [»] | |
5ZLU | electron microscopy | 3.60 | BB | 1-37 | [»] | |
6BUW | X-ray | 3.50 | R9/Y9 | 1-37 | [»] | |
6BZ6 | X-ray | 3.18 | R9/Y9 | 1-37 | [»] | |
6BZ7 | X-ray | 3.68 | R9/Y9 | 1-37 | [»] | |
6BZ8 | X-ray | 3.74 | R9/Y9 | 1-37 | [»] | |
6C5L | X-ray | 3.20 | B9/D9 | 1-37 | [»] | |
6CAE | X-ray | 2.60 | 19/29 | 1-37 | [»] | |
6CFJ | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
6CFK | X-ray | 2.70 | 19/29 | 1-37 | [»] | |
6CFL | X-ray | 2.60 | 19/29 | 1-37 | [»] | |
6CZR | X-ray | 3.14 | 19/29 | 1-37 | [»] | |
6FKR | X-ray | 3.20 | 19/29 | 1-37 | [»] | |
6GZQ | electron microscopy | 3.28 | e1 | 2-37 | [»] | |
6GZX | electron microscopy | 4.57 | e1/e2 | 2-37 | [»] | |
6GZZ | electron microscopy | 4.13 | e1/e2 | 2-37 | [»] | |
6ND5 | X-ray | 2.60 | 19/29 | 1-37 | [»] | |
6ND6 | X-ray | 2.85 | 19/29 | 1-37 | [»] | |
6NDK | X-ray | 3.64 | R9/Y9 | 1-37 | [»] | |
6NSH | X-ray | 3.40 | R9/Y9 | 1-37 | [»] | |
6NTA | X-ray | 3.10 | R9/Y9 | 1-37 | [»] | |
6NUO | X-ray | 3.20 | R9/Y9 | 1-37 | [»] | |
6NWY | X-ray | 3.50 | R9/Y9 | 1-37 | [»] | |
6O3M | X-ray | 3.97 | R9/Y9 | 1-37 | [»] | |
6O97 | X-ray | 2.75 | 19/29 | 1-37 | [»] | |
6OF1 | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
6OF6 | X-ray | 3.20 | R9/Y9 | 1-37 | [»] | |
6OJ2 | X-ray | 3.20 | R9/Y9 | 1-37 | [»] | |
6OPE | X-ray | 3.10 | R9/Y9 | 1-37 | [»] | |
6ORD | X-ray | 3.10 | R9/Y9 | 1-37 | [»] | |
6OSI | X-ray | 4.14 | R9/Y9 | 1-37 | [»] | |
6OTR | X-ray | 3.12 | R9/Y9 | 1-37 | [»] | |
6OXA | X-ray | 3.25 | R9/Y9 | 1-37 | [»] | |
6OXI | X-ray | 3.50 | R9/Y9 | 1-37 | [»] | |
6UCQ | X-ray | 3.50 | 19/29 | 1-37 | [»] | |
6UO1 | X-ray | 2.95 | 19/29 | 1-37 | [»] | |
6XHV | X-ray | 2.40 | 19/29 | 1-37 | [»] | |
6XHW | X-ray | 2.50 | 19/29 | 1-37 | [»] | |
6XHX | X-ray | 2.55 | 19/29 | 1-37 | [»] | |
6XHY | X-ray | 2.60 | 19/29 | 1-37 | [»] | |
6XQD | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
6XQE | X-ray | 3.00 | 19/29 | 1-37 | [»] | |
7JQL | X-ray | 3.00 | 19/29 | 1-37 | [»] | |
7JQM | X-ray | 3.05 | 19/29 | 1-37 | [»] | |
7LH5 | X-ray | 3.27 | B9/D9 | 1-37 | [»] | |
7MD7 | X-ray | 2.80 | 19/29 | 1-37 | [»] | |
7RQ8 | X-ray | 2.50 | 19/29 | 1-37 | [»] | |
7RQ9 | X-ray | 2.60 | 19/29 | 1-37 | [»] | |
SMRi | Q5SHR2 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
IntActi | Q5SHR2, 8 interactors |
STRINGi | 300852.55773050 |
Genome annotation databases
EnsemblBacteriai | BAD71491; BAD71491; BAD71491 |
GeneIDi | 3167970 |
KEGGi | ttj:TTHA1668 |
PATRICi | fig|300852.9.peg.1638 |
Phylogenomic databases
eggNOGi | COG0257, Bacteria |
HOGENOMi | CLU_135723_6_2_0 |
PhylomeDBi | Q5SHR2 |
Miscellaneous databases
EvolutionaryTracei | Q5SHR2 |
Family and domain databases
HAMAPi | MF_00251, Ribosomal_L36, 1 hit |
InterProi | View protein in InterPro IPR000473, Ribosomal_L36 IPR035977, Ribosomal_L36_sp |
PANTHERi | PTHR42888, PTHR42888, 1 hit |
Pfami | View protein in Pfam PF00444, Ribosomal_L36, 1 hit |
SUPFAMi | SSF57840, SSF57840, 1 hit |
TIGRFAMsi | TIGR01022, rpmJ_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00828, RIBOSOMAL_L36, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | RL36_THET8 | |
Accessioni | Q5SHR2Primary (citable) accession number: Q5SHR2 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | March 29, 2005 |
Last sequence update: | December 21, 2004 | |
Last modified: | February 23, 2022 | |
This is version 130 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families