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Protein

50S ribosomal protein L15

Gene

rplO

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-1679-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15
Gene namesi
Name:rplO
Ordered Locus Names:TTHA1673
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001048461 – 15050S ribosomal protein L15Add BLAST150

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.

Protein-protein interaction databases

STRINGi300852.TTHA1673

Structurei

Secondary structure

1150
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi25 – 29Combined sources5
Beta strandi37 – 40Combined sources4
Beta strandi53 – 55Combined sources3
Beta strandi81 – 84Combined sources4
Helixi85 – 88Combined sources4
Beta strandi93 – 95Combined sources3
Turni97 – 104Combined sources8
Beta strandi111 – 115Combined sources5
Beta strandi122 – 125Combined sources4
Beta strandi128 – 130Combined sources3
Helixi132 – 137Combined sources6
Beta strandi140 – 142Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VVJX-ray3.44RP/YP1-150[»]
1VY4X-ray2.60BP/DP1-150[»]
1VY5X-ray2.55BP/DP1-150[»]
1VY6X-ray2.90BP/DP1-150[»]
1VY7X-ray2.80BP/DP1-150[»]
4L47X-ray3.22RP/YP1-150[»]
4L71X-ray3.90RP/YP1-150[»]
4LELX-ray3.90RP/YP1-150[»]
4LFZX-ray3.92RP/YP1-150[»]
4LNTX-ray2.94RP/YP1-150[»]
4LSKX-ray3.48RP/YP1-150[»]
4LT8X-ray3.14RP/YP1-150[»]
4P6FX-ray3.60RP/YP1-150[»]
4P70X-ray3.68RP/YP1-150[»]
4TUAX-ray3.60RP/YP1-150[»]
4TUBX-ray3.60RP/YP1-150[»]
4TUCX-ray3.60RP/YP1-150[»]
4TUDX-ray3.60RP/YP1-150[»]
4TUEX-ray3.50RP/YP1-150[»]
4V42X-ray5.50BO1-150[»]
4V4PX-ray5.50O1-150[»]
4V4XX-ray5.00O1-150[»]
4V4YX-ray5.50O1-150[»]
4V4ZX-ray4.51O1-150[»]
4V51X-ray2.80BP/DP1-150[»]
4V5AX-ray3.50BP/DP1-150[»]
4V5CX-ray3.30BP/DP1-150[»]
4V5DX-ray3.50BP/DP1-150[»]
4V5EX-ray3.45BP/DP1-150[»]
4V5FX-ray3.60BP/DP1-150[»]
4V5GX-ray3.60BP/DP1-150[»]
4V5JX-ray3.10BP/DP1-150[»]
4V5KX-ray3.20BP/DP1-150[»]
4V5LX-ray3.10BP1-150[»]
4V5Melectron microscopy7.80BP1-150[»]
4V5Nelectron microscopy7.60BP1-150[»]
4V5PX-ray3.10BP/DP1-150[»]
4V5QX-ray3.10BP/DP1-150[»]
4V5RX-ray3.10BP/DP1-150[»]
4V5SX-ray3.10BP/DP1-150[»]
4V68electron microscopy6.40BP5-150[»]
4V6AX-ray3.10BP/DP1-150[»]
4V6FX-ray3.10AO/DO1-150[»]
4V6GX-ray3.50BO/DO1-150[»]
4V7JX-ray3.30AP/BP1-150[»]
4V7KX-ray3.60AP/BP1-150[»]
4V7LX-ray3.00BP/DP1-150[»]
4V7MX-ray3.45BP/DP1-150[»]
4V7WX-ray3.00BP/DP1-150[»]
4V7XX-ray3.00BP/DP1-150[»]
4V7YX-ray3.00BP/DP1-150[»]
4V7ZX-ray3.10BP/DP1-150[»]
4V87X-ray3.10AO/DO1-150[»]
4V8AX-ray3.20AP/BP1-150[»]
4V8BX-ray3.00BO/DO1-150[»]
4V8CX-ray3.30AO/BO1-150[»]
4V8DX-ray3.00BO/DO1-150[»]
4V8EX-ray3.30AO/CO1-150[»]
4V8FX-ray3.30AO/DO1-150[»]
4V8GX-ray3.00BP/DP1-150[»]
4V8HX-ray3.10BP/DP1-150[»]
4V8IX-ray2.70BP/DP1-150[»]
4V8JX-ray3.90BP/DP1-150[»]
4V8NX-ray3.10BP/DP1-150[»]
4V8OX-ray3.80BP1-150[»]
4V8QX-ray3.10AP1-150[»]
4V8UX-ray3.70BP/DP1-150[»]
4V8XX-ray3.35BP/DP1-150[»]
4V90X-ray2.95BP2-150[»]
4V95X-ray3.20BP/DP1-150[»]
4V97X-ray3.52BP/DP1-150[»]
4V9AX-ray3.30BO/DO1-150[»]
4V9BX-ray3.10BO/DO1-150[»]
4V9HX-ray2.86BP1-150[»]
4V9IX-ray3.30BP/DP5-150[»]
4V9RX-ray3.00BP/DP1-150[»]
4V9SX-ray3.10BP/DP1-150[»]
4W2EX-ray2.90P1-150[»]
4W2FX-ray2.40BP/DP1-150[»]
4W2GX-ray2.55BP/DP1-150[»]
4W2HX-ray2.70BP/DP1-150[»]
4W2IX-ray2.70BP/DP1-150[»]
4W4GX-ray3.30RP/YP1-150[»]
4WPOX-ray2.80AP/CP1-150[»]
4WQ1X-ray3.1035/781-150[»]
4WQFX-ray2.80AP/CP1-150[»]
4WQRX-ray3.1535/781-150[»]
4WQUX-ray2.80AP/CP1-150[»]
4WQYX-ray2.80AP/CP1-150[»]
4WR6X-ray3.0535/781-150[»]
4WRAX-ray3.0535/781-150[»]
4WROX-ray3.05781-150[»]
4WSDX-ray2.9535/781-150[»]
4WSMX-ray3.3035/781-150[»]
4WT1X-ray3.0535/781-150[»]
4WT8X-ray3.40CO/DO5-150[»]
4WU1X-ray3.2035/781-150[»]
4WZDX-ray3.1035/781-150[»]
4WZOX-ray3.3035/781-150[»]
4Y4OX-ray2.301P/2P1-150[»]
4Y4PX-ray2.501P/2P1-150[»]
4YPBX-ray3.40RP/YP1-150[»]
4YZVX-ray3.10RP/YP1-150[»]
4Z3SX-ray2.651P/2P1-150[»]
4Z8CX-ray2.901P/2P1-150[»]
4ZERX-ray3.101P/2P1-149[»]
4ZSNX-ray3.60RP/YP1-150[»]
5A9Zelectron microscopy4.70AM6-150[»]
5AA0electron microscopy5.00AM6-150[»]
5CZPX-ray3.30RP/YP1-150[»]
5D8BX-ray3.63FB/J1-150[»]
5DFEX-ray3.10RP/YP1-150[»]
5DOXX-ray3.101P/2P1-150[»]
5DOYX-ray2.601P/2P1-150[»]
5E7KX-ray3.2035/781-150[»]
5E81X-ray2.9535/781-150[»]
5EL4X-ray3.1535/781-150[»]
5EL5X-ray3.1535/781-150[»]
5EL6X-ray3.1035/781-150[»]
5EL7X-ray3.1535/781-150[»]
5F8KX-ray2.801P/2P1-149[»]
5FDUX-ray2.901P/2P1-149[»]
5FDVX-ray2.801P/2P1-149[»]
5HAUX-ray3.001N/2N1-150[»]
5HCPX-ray2.891P/2P1-150[»]
5HCQX-ray2.801P/2P1-150[»]
5HCRX-ray2.801P/2P1-150[»]
5HD1X-ray2.701P/2P1-150[»]
5IB7X-ray2.9935/781-150[»]
5IB8X-ray3.1335/781-150[»]
5IBBX-ray2.9635/781-150[»]
5IMQelectron microscopy3.80h1-150[»]
5IMRelectron microscopy-h1-150[»]
5J30X-ray3.20RP/YP1-150[»]
5J3CX-ray3.04RP/YP1-150[»]
5J4BX-ray2.601P/2P1-150[»]
5J4CX-ray2.801P/2P1-150[»]
5J8BX-ray2.60P1-150[»]
5NDJX-ray3.1535/781-150[»]
5NDKX-ray2.9535/781-150[»]
5OT7electron microscopy3.80q1-150[»]
5UQ7electron microscopy3.50P1-149[»]
5UQ8electron microscopy3.20P1-149[»]
5VP2X-ray2.801P/2P1-150[»]
5W4KX-ray2.701P/2P1-150[»]
5WISX-ray2.701P/2P1-150[»]
5WITX-ray2.601P/2P1-150[»]
6C5LX-ray3.20BP/DP1-150[»]
6CAEX-ray2.601P/2P1-150[»]
6CFJX-ray2.801P/2P1-150[»]
6CFKX-ray2.701P/2P1-150[»]
6CFLX-ray2.601P/2P1-150[»]
6FKRX-ray3.201P/2P1-149[»]
ProteinModelPortaliQ5SHQ7
SMRiQ5SHQ7
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5SHQ7

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4108UZ0 Bacteria
COG0200 LUCA
HOGENOMiHOG000231262
KOiK02876
OMAiFKNINRV
PhylomeDBiQ5SHQ7

Family and domain databases

HAMAPiMF_01341 Ribosomal_L15, 1 hit
InterProiView protein in InterPro
IPR036227 L18e/L15P_sf
IPR030878 Ribosomal_L15
IPR005749 Ribosomal_L15_bac-type
IPR001196 Ribosomal_L15_CS
IPR021131 Ribosomal_L18e/L15P
PANTHERiPTHR12934 PTHR12934, 1 hit
PfamiView protein in Pfam
PF00828 Ribosomal_L27A, 1 hit
SUPFAMiSSF52080 SSF52080, 1 hit
TIGRFAMsiTIGR01071 rplO_bact, 1 hit
PROSITEiView protein in PROSITE
PS00475 RIBOSOMAL_L15, 1 hit

Sequencei

Sequence statusi: Complete.

Q5SHQ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLSDLRPNP GANKRRKRVG RGPGSGHGKT ATRGHKGQKS RSGGLKDPRR
60 70 80 90 100
FEGGRSTTLM RLPKRGMQGQ VPGEIKRPRY QGVNLKDLAR FEGEVTPELL
110 120 130 140 150
VRAGLLKKGY RLKILGEGEA KPLKVVAHAF SKSALEKLKA AGGEPVLLEA
Length:150
Mass (Da):16,281
Last modified:December 21, 2004 - v1
Checksum:i0175AF33F530AD4F
GO

Mass spectrometryi

Molecular mass is 16284 Da from positions 1 - 150. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD71496.1
RefSeqiWP_011173703.1, NC_006461.1
YP_144939.1, NC_006461.1

Genome annotation databases

EnsemblBacteriaiBAD71496; BAD71496; BAD71496
GeneIDi3168730
KEGGittj:TTHA1673
PATRICifig|300852.9.peg.1643

Similar proteinsi

Entry informationi

Entry nameiRL15_THET8
AccessioniPrimary (citable) accession number: Q5SHQ7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 29, 2005
Last sequence update: December 21, 2004
Last modified: June 20, 2018
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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