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Entry version 137 (31 Jul 2019)
Sequence version 1 (21 Dec 2004)
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Protein
Submitted name:

Nuclear receptor co-repressor 1, isoform CRA_a

Gene

Ncor1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionReceptorImported

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Nuclear receptor co-repressor 1, isoform CRA_aImported
Submitted name:
Nuclear receptor corepressor 1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Ncor1Imported
ORF Names:mCG_23374Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 11

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1349717 Ncor1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000018501 Expressed in 298 organ(s), highest expression level in ear vesicle

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini436 – 487SANTInterPro annotationAdd BLAST52
Domaini623 – 674SANTInterPro annotationAdd BLAST52

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 117DisorderedSequence analysisAdd BLAST117
Regioni139 – 178DisorderedSequence analysisAdd BLAST40
Regioni207 – 232DisorderedSequence analysisAdd BLAST26
Regioni498 – 633DisorderedSequence analysisAdd BLAST136
Regioni678 – 925DisorderedSequence analysisAdd BLAST248
Regioni1035 – 1059DisorderedSequence analysisAdd BLAST25
Regioni1451 – 1546DisorderedSequence analysisAdd BLAST96
Regioni1698 – 1780DisorderedSequence analysisAdd BLAST83
Regioni1903 – 1941DisorderedSequence analysisAdd BLAST39
Regioni1960 – 2060DisorderedSequence analysisAdd BLAST101
Regioni2086 – 2175DisorderedSequence analysisAdd BLAST90
Regioni2304 – 2397DisorderedSequence analysisAdd BLAST94
Regioni2426 – 2454DisorderedSequence analysisAdd BLAST29

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili309 – 329Sequence analysisAdd BLAST21
Coiled coili1873 – 1893Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 39PolarSequence analysisAdd BLAST39
Compositional biasi47 – 70PolarSequence analysisAdd BLAST24
Compositional biasi101 – 116PolyampholyteSequence analysisAdd BLAST16
Compositional biasi164 – 178PolarSequence analysisAdd BLAST15
Compositional biasi505 – 571PolyampholyteSequence analysisAdd BLAST67
Compositional biasi605 – 620Pro-richSequence analysisAdd BLAST16
Compositional biasi678 – 698PolyampholyteSequence analysisAdd BLAST21
Compositional biasi712 – 731AcidicSequence analysisAdd BLAST20
Compositional biasi732 – 761PolarSequence analysisAdd BLAST30
Compositional biasi851 – 889PolyampholyteSequence analysisAdd BLAST39
Compositional biasi1492 – 1537PolarSequence analysisAdd BLAST46
Compositional biasi1716 – 1749PolyampholyteSequence analysisAdd BLAST34
Compositional biasi1924 – 1940PolyampholyteSequence analysisAdd BLAST17
Compositional biasi1970 – 1984PolarSequence analysisAdd BLAST15
Compositional biasi2014 – 2042PolarSequence analysisAdd BLAST29
Compositional biasi2086 – 2128PolarSequence analysisAdd BLAST43
Compositional biasi2143 – 2157PolyampholyteSequence analysisAdd BLAST15
Compositional biasi2345 – 2375PolarSequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1878 Eukaryota
ENOG410YDXP LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155093

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000113746

KEGG Orthology (KO)

More...
KOi
K04650

Identification of Orthologs from Complete Genome Data

More...
OMAi
MGNFDDK

Database of Orthologous Groups

More...
OrthoDBi
12227at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00167 SANT, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR009057 Homeobox-like_sf
IPR031557 N-CoR_GPS2_interact
IPR001005 SANT/Myb
IPR017884 SANT_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF15784 GPS2_interact, 1 hit
PF00249 Myb_DNA-binding, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00717 SANT, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46689 SSF46689, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51293 SANT, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 14 potential isoforms that are computationally mapped.Show allAlign All

Q5RIM6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSSGYPPNQ GAFSTEQSRY PSHSVQYTFP STRHQQEFAV PDYRSSHIEV
60 70 80 90 100
SQASQLLQQQ QQQQQLRRRP SLLSEFHPGS DRPQERRTGY EQFHSGPSPV
110 120 130 140 150
DHDSLESKRP RLEPVSDAHF QRVSAAVLPL VHSLPEGLRS SADAKKDSAF
160 170 180 190 200
GSKHEAPSSP LAGQPCGDDQ NASPSKLSKE ELIQSMDRVD REIAKVEQQI
210 220 230 240 250
LKLKKKQQQL EEEAAKPPEP EKPVSPPPVE QKHRSIVQII YDENRKKAEE
260 270 280 290 300
AHKIFEGLGP KVELPLYNQP SDTKVYHENI KTNQVMRKKL ILFFKRRNHA
310 320 330 340 350
RKQREQKICQ RYDQLMEAWE KKVDRIENNP RRKAKESKTR EYYEKQFPEI
360 370 380 390 400
RKQREQQERF QRVGQRGAGL SATIARSEHE ISEIIDGLSE QENNEKQMRQ
410 420 430 440 450
LSVIPPMMFD AEQRRVKFIN MNGLMEDPMK VYKDRQFMNV WTDHEKEIFK
460 470 480 490 500
DKFIQHPKNF GLIASYLERK SVPDCVLYYY LTKKNENYKA LVRRNYGKRR
510 520 530 540 550
GRNQQIARPS QEEKVEEKEE DKAEKTEKKE EEKKDDEEKD DKEDSKETTK
560 570 580 590 600
EKDRTEATAE EPEEREQVTP RGRKTANSQG RRKGRVTRSM TSEAAAANAA
610 620 630 640 650
AAATEEPPPP LPPPPEPIST EPVETSRWTE EEMEVAKKGL VEHGRNWAAI
660 670 680 690 700
AKMVGTKSEA QCKNFYFNYK RRHNLDNLLQ QHKQKASRKP REERDVSQCE
710 720 730 740 750
SVASTVSAQE DEDIEASNEE ENPEDSEGAE NSSDTESAPS PSPVEAAKSS
760 770 780 790 800
EDSSENAASR GNTEPVAELE ATTDPAPCAS PSSAVPTTKP AERESVEAQV
810 820 830 840 850
TDSASAETAE PMDVDHEECG AEGSSVLDPP APTKADSVDP EMQVPENTAS
860 870 880 890 900
KGEGDAKERD LESTSEKTEA RDEDVVVAEQ IERPEPQSDD DSSATCSADE
910 920 930 940 950
GVDGEPERQR VFPMDAKPSL LTPPGSILIS SPIKPNPLDL PQLQHRAAVI
960 970 980 990 1000
PPMVSCTPCN IPIGTPVSGY ALYQRHIKAM HESALLEEQR QRQEQVDLEC
1010 1020 1030 1040 1050
RSSTSPCSTS KSPNREWEVL QPAPHQVITN LPEGVRLPTT RPTRPPPPLI
1060 1070 1080 1090 1100
PSSKTTVASE KPSFIMGGSI SQGTPGTYLS SHNQAYPQEA PKPSVGSISL
1110 1120 1130 1140 1150
GLPRQQESTK AAPLTYIKQE EFSPRSQNSQ PEGLLVRAQH EGVVRGTAGA
1160 1170 1180 1190 1200
VQEGSITRGT PASKISVETI SSLRGSITQG TPALPQAGIP TEALVKGPVS
1210 1220 1230 1240 1250
RMPIEESSPE KVREEAASKG HVIYEGKSGH ILSYDNIKNA REGTRSPRTA
1260 1270 1280 1290 1300
HEMSLKRSYE AVEGSIKQGM SMRESPVSAP LEGLICRALP RGSPHSDLKE
1310 1320 1330 1340 1350
RTVLSGSIMQ GTPRATAESF EDGLKYPKQI KRESPPIRAF EGAITKGKPY
1360 1370 1380 1390 1400
DGITTIKEMG RSIHEIPRQD ILTQESRKTP EVVQSTRPII EGSISQGTPI
1410 1420 1430 1440 1450
KFDNNSGQSA IKHNVKSLIT GPSKLPRGML EIVPENIKVV ERGKYEDVKA
1460 1470 1480 1490 1500
GEPVRARHTS VVSSGPSVLR STLHEAPKAQ LSPGLYDDSS ARRTPVSYQN
1510 1520 1530 1540 1550
TISRGSPMMN RTSDVSSSKS ASHERKSTLT PTQRESIPAK SPVPGVDPVV
1560 1570 1580 1590 1600
SHSPFDPHHR SSAAGEVYRS HLPTHLDPAM PFHRALDPAA AYLLQRQLSP
1610 1620 1630 1640 1650
TPGYPSQYQL YAMENTRQTI LNDYITSQQM QVNLRPDVTR GLSPREQPLG
1660 1670 1680 1690 1700
LPYPATRGII DLTNMPPTIL VPHAGGTSTP PMDRITYIPG TQVTFPPRPY
1710 1720 1730 1740 1750
NAASLSPGHP THLAAAASAE REREREREKE RERERERERE RERERIAAAP
1760 1770 1780 1790 1800
ADLYLRPGSE QPGRPGSHGY VRSPSPSVRT QETILQQRPS VFQGTNGTSV
1810 1820 1830 1840 1850
ITPLDPTAQL RIMPLPSGGP SISQGLPASR YNTAADALAA LVDAAASAPQ
1860 1870 1880 1890 1900
MDVSKTKESK HEAARLEENL RSRSAAVSEQ QQLEQKNLEV EKRSVQCVCT
1910 1920 1930 1940 1950
SSALPSGKAQ PHASVVYSEA GKDKGPPPKS RYEEELRTRG KTTITAANFI
1960 1970 1980 1990 2000
DVIITRQIAS DKDARERGSQ SSDSSSSLSS HRYETASDAI EVISPASSPA
2010 2020 2030 2040 2050
PPQEKPQAYQ PDMVKANQAE NESTRQYEGP LHHYRSQQES PSPQQQPPLP
2060 2070 2080 2090 2100
PSSQSEGMGQ VPRTHRLITL ADHICQIITQ DFARNQVPSQ PSTSTFQTSP
2110 2120 2130 2140 2150
SALSSTPVRT KTSSRYSPES QSQTVLHPRP GPRVSPENLV DKSRGSRPGK
2160 2170 2180 2190 2200
SPERSHIPSE PYEPISPPQG PAVHEKQDSM LLLSQRGVDP AEQRSDSRSP
2210 2220 2230 2240 2250
GSISYLPSFF TKLESTSPMV KSKKQEIFRK LNSSGGGDSD MAAAQPGTEI
2260 2270 2280 2290 2300
FNLPAVTTSG AVSSRSHSFA DPASNLGLED IIRKALMGSF DDKVEDHGVV
2310 2320 2330 2340 2350
MSHPVGIMPG SASTSVVTSS EARRDEGEPS PHAGVCKPKL INKSNSRKSK
2360 2370 2380 2390 2400
SPIPGQSYLG TERPSSVSSV HSEGDYHRQT PGWAWEDRPS STGSTQFPYN
2410 2420 2430 2440 2450
PLTIRMLSST PPTQIACAPS AITQAAPHQQ NRIWEREPAP LLSAQYETLS

DSDD
Length:2,454
Mass (Da):270,787
Last modified:December 21, 2004 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i7CF547975841F6F5
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 14 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q60974NCOR1_MOUSE
Nuclear receptor corepressor 1
Ncor1 Rxrip13
2,453Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E9Q2B2E9Q2B2_MOUSE
Nuclear receptor corepressor 1
Ncor1
2,386Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E9Q8K6E9Q8K6_MOUSE
Nuclear receptor corepressor 1
Ncor1
791Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Q5RIN0Q5RIN0_MOUSE
Nuclear receptor corepressor 1
Ncor1
541Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6SFD2F6SFD2_MOUSE
Nuclear receptor corepressor 1
Ncor1
261Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6TWR1F6TWR1_MOUSE
Nuclear receptor corepressor 1
Ncor1
254Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6U338F6U338_MOUSE
Nuclear receptor corepressor 1
Ncor1
216Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Q3UV08Q3UV08_MOUSE
Nuclear receptor corepressor 1
Ncor1
993Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
Q8CHB6Q8CHB6_MOUSE
MKIAA1047 protein
Ncor1 mKIAA1047
1,724Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E9Q9Y2E9Q9Y2_MOUSE
Nuclear receptor corepressor 1
Ncor1
1,399Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
There are more potential isoformsShow all

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL596110 Genomic DNA No translation available.
BX248411 Genomic DNA No translation available.
CH466601 Genomic DNA Translation: EDL10341.1
CH466601 Genomic DNA Translation: EDL10342.1

NCBI Reference Sequences

More...
RefSeqi
NP_001239242.1, NM_001252313.1
XP_006532687.1, XM_006532624.3

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000018645; ENSMUSP00000018645; ENSMUSG00000018501
ENSMUST00000101066; ENSMUSP00000098627; ENSMUSG00000018501

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
20185

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:20185

UCSC genome browser

More...
UCSCi
uc007jiw.2 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL596110 Genomic DNA No translation available.
BX248411 Genomic DNA No translation available.
CH466601 Genomic DNA Translation: EDL10341.1
CH466601 Genomic DNA Translation: EDL10342.1
RefSeqiNP_001239242.1, NM_001252313.1
XP_006532687.1, XM_006532624.3

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000018645; ENSMUSP00000018645; ENSMUSG00000018501
ENSMUST00000101066; ENSMUSP00000098627; ENSMUSG00000018501
GeneIDi20185
KEGGimmu:20185
UCSCiuc007jiw.2 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
9611
MGIiMGI:1349717 Ncor1

Phylogenomic databases

eggNOGiKOG1878 Eukaryota
ENOG410YDXP LUCA
GeneTreeiENSGT00940000155093
HOGENOMiHOG000113746
KOiK04650
OMAiMGNFDDK
OrthoDBi12227at2759

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
Ncor1 mouse

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSMUSG00000018501 Expressed in 298 organ(s), highest expression level in ear vesicle

Family and domain databases

CDDicd00167 SANT, 2 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR031557 N-CoR_GPS2_interact
IPR001005 SANT/Myb
IPR017884 SANT_dom
PfamiView protein in Pfam
PF15784 GPS2_interact, 1 hit
PF00249 Myb_DNA-binding, 1 hit
SMARTiView protein in SMART
SM00717 SANT, 2 hits
SUPFAMiSSF46689 SSF46689, 2 hits
PROSITEiView protein in PROSITE
PS51293 SANT, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ5RIM6_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q5RIM6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: July 31, 2019
This is version 137 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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