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Protein
Submitted name:

Nucleoporin 107

Gene

nup107

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-DRE-141444 Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
R-DRE-159236 Transport of Mature mRNA derived from an Intron-Containing Transcript
R-DRE-170822 Regulation of Glucokinase by Glucokinase Regulatory Protein
R-DRE-191859 snRNP Assembly
R-DRE-2467813 Separation of Sister Chromatids
R-DRE-2500257 Resolution of Sister Chromatid Cohesion
R-DRE-3108214 SUMOylation of DNA damage response and repair proteins
R-DRE-3232142 SUMOylation of ubiquitinylation proteins
R-DRE-3301854 Nuclear Pore Complex (NPC) Disassembly
R-DRE-4085377 SUMOylation of SUMOylation proteins
R-DRE-4551638 SUMOylation of chromatin organization proteins
R-DRE-4570464 SUMOylation of RNA binding proteins
R-DRE-5578749 Transcriptional regulation by small RNAs
R-DRE-5663220 RHO GTPases Activate Formins

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleoporin 107Imported
Gene namesi
Name:nup107Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 4

Organism-specific databases

ZFINiZDB-GENE-041210-245 nup107

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiQ5RGI2

Expressioni

Gene expression databases

BgeeiENSDARG00000016010 Expressed in 29 organ(s), highest expression level in paraxial mesoderm

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000040032

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1964 Eukaryota
ENOG410XRUG LUCA
GeneTreeiENSGT00390000012080
HOVERGENiHBG052677
InParanoidiQ5RGI2
KOiK14301
OMAiKVQIDIR
PhylomeDBiQ5RGI2
TreeFamiTF324259

Family and domain databases

InterProiView protein in InterPro
IPR007252 Nup84/Nup107
PANTHERiPTHR13003 PTHR13003, 1 hit
PfamiView protein in Pfam
PF04121 Nup84_Nup100, 1 hit

Sequencei

Sequence statusi: Complete.

Q5RGI2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEWSQTWLSP VVRDAEVTRA ARRKSSHKKV AFPLAQDDSP GTSTTPARPL
60 70 80 90 100
LRQTPGPRLK QTFTPRSALR NPDVSAILGT SGSRTPRFVN TPRTKGGLSM
110 120 130 140 150
NLDDSDWTNS LYPSPLSGIV DTSFTDDVSM SALMLKEDDP GEAASLGLFP
160 170 180 190 200
EFLESYLRHA STAVFDLLEE YEALCQDKVS VLQKLVLRSA PGQQKSSKTV
210 220 230 240 250
SITWLLQQEM VTWRLITSLY RDRVQTVLEE DIMMDITMPS ESEKAVMEQF
260 270 280 290 300
FQKDSMVRQS QLVVDWLESI AKDDIGDFSD NIEYYAKSVY WENTLHTLKL
310 320 330 340 350
RRNQSSGGLS RPLVTELDPD APIRQKRPLA DLDREDDSRL LKNLFNLIRA
360 370 380 390 400
GMTDEAQRLC KRCGQAWRAA TLEGWKLYHD PNINGGGGEL QPVEGNPHRS
410 420 430 440 450
VWKVCCWRMA EEEQFNKYER AIYAALSGNL KQLLPVCESW EDTVWAYFRV
460 470 480 490 500
MVDTLVEQEI CSSGLGSEEL EELPRDFLET NWTLEKVFEE IQATESKRVL
510 520 530 540 550
DATKEHYHVI QKFVILGDLD GLLEEFSDWL GRNTPLPAHL LRFMSHLVLF
560 570 580 590 600
YRSLGMQLKE EVCVDVLKAY ISLLVKEKQV ELIAFYVSHL PADLAVSQYA
610 620 630 640 650
QFLEEVTETE QRKHCLELAT QAGLEVAAIT KTVVETIRER DTDEFSHHDL
660 670 680 690 700
TPALDTATTV EDQQKIDVID WLVFDPAQRA EALKQSNAIM RKFLASKKHD
710 720 730 740 750
AAKMVFAKVP EDSMREIYRQ WEEQGMDTPL PAEEENAIRE HLCIRAYLEA
760 770 780 790 800
HEAFNEWFKH MNCPPVKPTA PAQAKFTEKV AHEMKEAEYK IELENWQGRL
810 820 830 840 850
GALTEDVKER IYNVLLFVDG GWMVDVREDA EEDSERSHQM TLLRRLCLPM
860 870 880 890 900
MSFLLLTVLQ RTERHQESLR LADIIASDQH KLYEVFSKDE LQKFLQKMRE
910
SSLLLLDKGL DPLGYEIQP
Length:919
Mass (Da):105,397
Last modified:December 21, 2004 - v1
Checksum:iF07A438C4D9EEB9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX897665 Genomic DNA No translation available.
RefSeqiNP_001025338.1, NM_001030167.1
UniGeneiDr.48434

Genome annotation databases

EnsembliENSDART00000040033; ENSDARP00000040032; ENSDARG00000016010
GeneIDi562350
KEGGidre:562350

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX897665 Genomic DNA No translation available.
RefSeqiNP_001025338.1, NM_001030167.1
UniGeneiDr.48434

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000040032

Proteomic databases

PaxDbiQ5RGI2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000040033; ENSDARP00000040032; ENSDARG00000016010
GeneIDi562350
KEGGidre:562350

Organism-specific databases

CTDi57122
ZFINiZDB-GENE-041210-245 nup107

Phylogenomic databases

eggNOGiKOG1964 Eukaryota
ENOG410XRUG LUCA
GeneTreeiENSGT00390000012080
HOVERGENiHBG052677
InParanoidiQ5RGI2
KOiK14301
OMAiKVQIDIR
PhylomeDBiQ5RGI2
TreeFamiTF324259

Enzyme and pathway databases

ReactomeiR-DRE-141444 Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
R-DRE-159236 Transport of Mature mRNA derived from an Intron-Containing Transcript
R-DRE-170822 Regulation of Glucokinase by Glucokinase Regulatory Protein
R-DRE-191859 snRNP Assembly
R-DRE-2467813 Separation of Sister Chromatids
R-DRE-2500257 Resolution of Sister Chromatid Cohesion
R-DRE-3108214 SUMOylation of DNA damage response and repair proteins
R-DRE-3232142 SUMOylation of ubiquitinylation proteins
R-DRE-3301854 Nuclear Pore Complex (NPC) Disassembly
R-DRE-4085377 SUMOylation of SUMOylation proteins
R-DRE-4551638 SUMOylation of chromatin organization proteins
R-DRE-4570464 SUMOylation of RNA binding proteins
R-DRE-5578749 Transcriptional regulation by small RNAs
R-DRE-5663220 RHO GTPases Activate Formins

Gene expression databases

BgeeiENSDARG00000016010 Expressed in 29 organ(s), highest expression level in paraxial mesoderm

Family and domain databases

InterProiView protein in InterPro
IPR007252 Nup84/Nup107
PANTHERiPTHR13003 PTHR13003, 1 hit
PfamiView protein in Pfam
PF04121 Nup84_Nup100, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ5RGI2_DANRE
AccessioniPrimary (citable) accession number: Q5RGI2
Entry historyiIntegrated into UniProtKB/TrEMBL: December 21, 2004
Last sequence update: December 21, 2004
Last modified: October 10, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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