UniProtKB - Q5QPC7 (Q5QPC7_HUMAN)
Protein
Submitted name:
Collagen alpha-1(X) chain
Gene
COL10A1
Organism
Homo sapiens (Human)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Collagen alpha-1(X) chainImported |
Gene namesi | Name:COL10A1Imported |
Organismi | Homo sapiens (Human)Imported |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Proteomesi |
|
Organism-specific databases
HGNCi | HGNC:2185, COL10A1 |
VEuPathDBi | HostDB:ENSG00000123500.9 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 18 | Sequence analysisAdd BLAST | 18 | |
ChainiPRO_5004260761 | 19 – 216 | Sequence analysisAdd BLAST | 198 |
Proteomic databases
PeptideAtlasi | Q5QPC7 |
PRIDEi | Q5QPC7 |
ProteomicsDBi | 63646 |
Expressioni
Gene expression databases
Bgeei | ENSG00000123500, Expressed in tibia and 144 other tissues |
ExpressionAtlasi | Q5QPC7, baseline and differential |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 55 – 216 | DisorderedSequence analysisAdd BLAST | 162 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 63 – 83 | Pro-richSequence analysisAdd BLAST | 21 | |
Compositional biasi | 93 – 107 | Pro-richSequence analysisAdd BLAST | 15 | |
Compositional biasi | 134 – 151 | Pro-richSequence analysisAdd BLAST | 18 |
Keywords - Domaini
SignalSequence analysisPhylogenomic databases
GeneTreei | ENSGT00940000154317 |
HOGENOMi | CLU_1280298_0_0_1 |
Family and domain databases
InterProi | View protein in InterPro IPR008160, Collagen |
Pfami | View protein in Pfam PF01391, Collagen, 2 hits |
(1+)i Sequence
Sequence statusi: Fragment.
This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All
Q5QPC7-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLPQIPFLLL VSLNLVHGVF YAERYQMPTG IKGPLPNTKT QFFIPYTIKS
60 70 80 90 100
KGIAVRGEQG TPGPPGPAGP RGHPGPSGPP GKPGYGSPGL QGEPGLPGPP
110 120 130 140 150
GPSAVGKPGV PGLPGKPGER GPYGPKGDVG PAGLPGPRGP PGPPGIPGPA
160 170 180 190 200
GISVPGKPGQ QGPTGAPGPR GFPGEKGAPG VPGMNGQKGE MGYGAPGRPG
210
ERGLPGPQGP TGPSGP
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketQ03692 | COAA1_HUMAN | Collagen alpha-1(X) chain | COL10A1 | 680 | Annotation score: | ||
Q5QPC8 | Q5QPC8_HUMAN | Collagen alpha-1(X) chain | COL10A1 | 51 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 216 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL121963 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENST00000452729; ENSP00000411285; ENSG00000123500 |
UCSCi | uc063qxj.1, human |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL121963 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PeptideAtlasi | Q5QPC7 |
PRIDEi | Q5QPC7 |
ProteomicsDBi | 63646 |
Protocols and materials databases
Antibodypediai | 32484, 136 antibodies |
Genome annotation databases
Ensembli | ENST00000452729; ENSP00000411285; ENSG00000123500 |
UCSCi | uc063qxj.1, human |
Organism-specific databases
HGNCi | HGNC:2185, COL10A1 |
OpenTargetsi | ENSG00000123500 |
VEuPathDBi | HostDB:ENSG00000123500.9 |
GenAtlasi | Search... |
Phylogenomic databases
GeneTreei | ENSGT00940000154317 |
HOGENOMi | CLU_1280298_0_0_1 |
Miscellaneous databases
ChiTaRSi | COL10A1, human |
Gene expression databases
Bgeei | ENSG00000123500, Expressed in tibia and 144 other tissues |
ExpressionAtlasi | Q5QPC7, baseline and differential |
Family and domain databases
InterProi | View protein in InterPro IPR008160, Collagen |
Pfami | View protein in Pfam PF01391, Collagen, 2 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q5QPC7_HUMAN | |
Accessioni | Q5QPC7Primary (citable) accession number: Q5QPC7 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | January 4, 2005 |
Last sequence update: | August 21, 2007 | |
Last modified: | February 10, 2021 | |
This is version 98 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |