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Entry version 83 (02 Jun 2021)
Sequence version 1 (04 Jan 2005)
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Protein

Xin actin-binding repeat-containing protein 1

Gene

xirp1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Protects actin filaments from depolymerization.

By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionActin-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Xin actin-binding repeat-containing protein 1
Alternative name(s):
Cardiomyopathy-associated protein 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:xirp1
Synonyms:cmya1, xin
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7955 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesDanionidaeDanioninaeDanio
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000437 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

Organism-specific databases

Zebrafish Information Network genome database

More...
ZFINi
ZDB-GENE-050221-2, xirp1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cell junction

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003169861 – 2297Xin actin-binding repeat-containing protein 1Add BLAST2297

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei952Phosphoserine1 Publication1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q5PZ43

PRoteomics IDEntifications database

More...
PRIDEi
Q5PZ43

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q5PZ43

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSDARG00000030722, Expressed in heart and 28 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q5PZ43, baseline

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with F-actin, FLNC and VASP.

By similarity

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
7955.ENSDARP00000042412

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q5PZ43

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati104 – 119Xin 1Add BLAST16
Repeati139 – 154Xin 2Add BLAST16
Repeati169 – 184Xin 3Add BLAST16
Repeati208 – 223Xin 4Add BLAST16
Repeati248 – 263Xin 5Add BLAST16
Repeati286 – 301Xin 6Add BLAST16
Repeati323 – 338Xin 7Add BLAST16
Repeati362 – 377Xin 8Add BLAST16
Repeati396 – 411Xin 9Add BLAST16
Repeati464 – 479Xin 10Add BLAST16
Repeati494 – 509Xin 11Add BLAST16
Repeati532 – 547Xin 12Add BLAST16
Repeati570 – 585Xin 13Add BLAST16
Repeati605 – 620Xin 14Add BLAST16
Repeati638 – 653Xin 15Add BLAST16
Repeati677 – 692Xin 16Add BLAST16
Repeati715 – 730Xin 17Add BLAST16
Repeati747 – 762Xin 18Add BLAST16
Repeati779 – 794Xin 19Add BLAST16
Repeati818 – 833Xin 20Add BLAST16
Repeati856 – 871Xin 21Add BLAST16
Repeati893 – 908Xin 22Add BLAST16
Repeati928 – 943Xin 23Add BLAST16
Repeati959 – 974Xin 24Add BLAST16
Repeati997 – 1012Xin 25Add BLAST16
Repeati1033 – 1048Xin 26Add BLAST16

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 28DisorderedSequence analysisAdd BLAST28
Regioni433 – 461DisorderedSequence analysisAdd BLAST29
Regioni1617 – 1680DisorderedSequence analysisAdd BLAST64
Regioni1866 – 1900DisorderedSequence analysisAdd BLAST35
Regioni2147 – 2191DisorderedSequence analysisAdd BLAST45
Regioni2243 – 2297DisorderedSequence analysisAdd BLAST55

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 15Basic and acidic residuesSequence analysisAdd BLAST15
Compositional biasi1617 – 1659Polar residuesSequence analysisAdd BLAST43
Compositional biasi1866 – 1885Basic and acidic residuesSequence analysisAdd BLAST20
Compositional biasi1886 – 1900Polar residuesSequence analysisAdd BLAST15
Compositional biasi2159 – 2184Polar residuesSequence analysisAdd BLAST26
Compositional biasi2243 – 2281Polar residuesSequence analysisAdd BLAST39

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

Xin repeats bind F-actin.PROSITE-ProRule annotation

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the Xin family.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502QTAC, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00530000063779

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_001095_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q5PZ43

Identification of Orthologs from Complete Genome Data

More...
OMAi
KNYKWMF

Database of Orthologous Groups

More...
OrthoDBi
34408at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q5PZ43

TreeFam database of animal gene trees

More...
TreeFami
TF330745

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR012510, Actin-binding_Xin_repeat
IPR030072, XIRP1/XIRP2

The PANTHER Classification System

More...
PANTHERi
PTHR22591, PTHR22591, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF08043, Xin, 15 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51389, XIN, 26 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q5PZ43-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAEVAKQKKA TEAVCGDEDF PPPPPPLPRP QVLESLQKDL SQNFLPVPPP
60 70 80 90 100
KETFSEIYQQ RQKSELKRLF KHIHPELKMT VDDVVDDELI DAINPQAADA
110 120 130 140 150
AYQGEVQSMR WIFENWTLDN IGDPHETKKL LCEENPQGGD VKGKSSLFEH
160 170 180 190 200
STFDSQHAAG AERAGVVRGD VRTATWLFET QPLDSISKSK IEDEEIVEVV
210 220 230 240 250
LKEPVQKGDV TGARRLFETK PLDSLGRCCS VEDQHFLTLK SELQENKGDV
260 270 280 290 300
KKTVKLFQAD PCCALRDSNG KIHEIKSICR EEIMSSDFKT ARWLFETQPL
310 320 330 340 350
DHINEGAHVQ IIRGISLEEA QRGGVDKKKW MFETQPLDAI HEGVVEEQKF
360 370 380 390 400
QGTAVEGFSG AADVHNKLQL FENQPLSSLK GDSEGDVLEK EAIVGGNVGS
410 420 430 440 450
TLWLFETQPM DTLKDSYEVG RLQKVMVSSD EKGEVQDKRM QFEKSTAGKT
460 470 480 490 500
AGDSGNKVQN DEKGDVKTFK SLFETLPLNV SEKAQSQIHD ITSGDVKGHC
510 520 530 540 550
SLFETTPLYA IKDCAGKFHE VTTVSREECI KGNVQNYKWM FETRPLDQFE
560 570 580 590 600
EGSGKVELIK GITRQEDMTD DTRTAKWMFE TQPLDCMSLN SRTDVDSTQK
610 620 630 640 650
EFKKSNVKTC KWLFETKPMD MLYEKSEGKQ DVEPVPKADV KSHTWLFETQ
660 670 680 690 700
PLDNIKDKEN LGLKLCSTVQ EDVKSDVNVK TVKHLFETEP LDRITDQADS
710 720 730 740 750
GQNVRCVSQV DMQSGDVSRV KEIFESKSLG TESSKWSEEQ KNEIQSGSVH
760 770 780 790 800
KFTWLFENQP IGDINEKEER IVSCDVEAGD VGGKKFIFET LSLDKIKDKD
810 820 830 840 850
ELLEHPSMII EKPLSSSVNV KSNTMLFESQ PLYAIRDKDG QFHEVTTVMK
860 870 880 890 900
EEVMRGDVRG ARWMFETKPL DTIQADKEIY VIRAVTQEDV HKGDVKSARW
910 920 930 940 950
KFETQPLDSF TPHEGPSVRV VEDIGNEKCV QQSRQLFETE QASQKKFVRM
960 970 980 990 1000
VSVTDVQQGD VRTSTWLFEN QPIDTLKGEP DEQNNLTAVH REDNTKGDVK
1010 1020 1030 1040 1050
RCTWLFESQS LDKIKDNKPT EELVSSREEI PKADVKSTTW LFETTPLDKI
1060 1070 1080 1090 1100
TVESVTDILY RLCHNSFIHS SGIIIQANDY KYVNMAKYQI MKDEGPKVLK
1110 1120 1130 1140 1150
EEVVEGNIRN LMLQLLFKPN IKPMVVLLKE DEQGKMHSTV LEIPFQQPGS
1160 1170 1180 1190 1200
ATNPEAECKT QEAVKIIENL LVQQKEIKTG LVMQESEGGQ PEMTVYSLHC
1210 1220 1230 1240 1250
ESSLTESQTI TRGDVKSTIG NLLATVHSQQ TKQSCRMEEI ERGNVNLYKS
1260 1270 1280 1290 1300
CIEKGDLKSL QRELSEEDLV TSCRDQIEIV QGDVKEAMRH LSQQREQVER
1310 1320 1330 1340 1350
TILDVVPGDV KNVKKVFSDV CTDLSIGNCV PREEIVRGDI LSAKQQLGEA
1360 1370 1380 1390 1400
VKQQVMVQKE EIVSGDIKAT LESLERAKQQ SMQVEREVIK PGTIYDLNVE
1410 1420 1430 1440 1450
AEEMCSEENE SKLVKEEIIP GDIKAAKRSL ERAKNQSMKV EREPITPGKL
1460 1470 1480 1490 1500
YNLNETSQCQ SSTTVEQSTT STYSNHRITT TFRKVSDIEK DQESIKRLCC
1510 1520 1530 1540 1550
LNEVGGGGKN IYINTEDALR MVDISESVPD VVKGDVKATI QSLRSASTEQ
1560 1570 1580 1590 1600
RSVDREEIVR GNMQETLQCL KKSSINISRG DYKAAMLYKQ SGQPYTQSKI
1610 1620 1630 1640 1650
TNDSGTKDCK QSFDHIPSSH TQLSSSVSVT RSEHPTSLAL NSESVSSNAD
1660 1670 1680 1690 1700
NSKNSSAFTG KDEHPPPILP KTGHQVKDQK PVIPPKPLHI TTSSPPLFTE
1710 1720 1730 1740 1750
TSNMCPNSTV SINDTQQTPA IPLKVTPSNK MFTHETEIAK TSNKIKDKES
1760 1770 1780 1790 1800
KIHEQVQRTN LTDPTDFQRM QYTEQWVQNS HMQITDTPSV NKTDSFKNGS
1810 1820 1830 1840 1850
FPGDSIGMEK NVVQRINAAE EIRMCYSKDN DELNKGFKAV LQNFGEKKTT
1860 1870 1880 1890 1900
TDTGSPFPKK IKVVQKENIQ EQAKTSNKDE LHFTSRDTSS TPNKHEVPSI
1910 1920 1930 1940 1950
HNNSENKVVL REKKAKRETE DERRQRLSIH RDEIMRGNVK AAMEIFENLM
1960 1970 1980 1990 2000
RREELKVILS KVQEIEGETF EVDVRSLKTL FENVPAWITN PKENTKRRHR
2010 2020 2030 2040 2050
PRVAKETEGL RDDLESISSV EAAFEDLEKA SMDIVNLKEQ TLAKLLDIEE
2060 2070 2080 2090 2100
AIKKALYSVS NLKSEADIAG LSGLFSESLS PDNVSPSTKN IRKISIVSSK
2110 2120 2130 2140 2150
TKPAQSNQMQ SADNRALYKE VPHVPQVQVS KQSSNVPSSP SFISIHSAAR
2160 2170 2180 2190 2200
KPAESPTDKP KTNADQSNAG SSSSQNSSAS HICSPPSPRR KVSVLEVQRV
2210 2220 2230 2240 2250
PEVPSGIFGT KTVSEKYEET DCFGNTYYSS KRSTFVTRQS ETELSSSYDV
2260 2270 2280 2290
VTSPRRSEGM TSPVLQRSGQ SFSSNSLSKG KDRKVFVTFG HPNTEKH
Length:2,297
Mass (Da):258,390
Last modified:January 4, 2005 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i868881EE077B2D3E
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F8W4Z1F8W4Z1_DANRE
Xin actin-binding repeat-containing...
xirp1
1,484Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A2R8QE60A0A2R8QE60_DANRE
Xin actin-binding repeat-containing...
xirp1
2,321Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY812746 mRNA Translation: AAV68693.1

NCBI Reference Sequences

More...
RefSeqi
NP_001012377.1, NM_001012377.1
XP_009296785.1, XM_009298510.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSDART00000042413; ENSDARP00000042412; ENSDARG00000030722

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
497637

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
dre:497637

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY812746 mRNA Translation: AAV68693.1
RefSeqiNP_001012377.1, NM_001012377.1
XP_009296785.1, XM_009298510.1

3D structure databases

SMRiQ5PZ43
ModBaseiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000042412

PTM databases

iPTMnetiQ5PZ43

Proteomic databases

PaxDbiQ5PZ43
PRIDEiQ5PZ43

Genome annotation databases

EnsembliENSDART00000042413; ENSDARP00000042412; ENSDARG00000030722
GeneIDi497637
KEGGidre:497637

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
165904
ZFINiZDB-GENE-050221-2, xirp1

Phylogenomic databases

eggNOGiENOG502QTAC, Eukaryota
GeneTreeiENSGT00530000063779
HOGENOMiCLU_001095_0_0_1
InParanoidiQ5PZ43
OMAiKNYKWMF
OrthoDBi34408at2759
PhylomeDBiQ5PZ43
TreeFamiTF330745

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q5PZ43

Gene expression databases

BgeeiENSDARG00000030722, Expressed in heart and 28 other tissues
ExpressionAtlasiQ5PZ43, baseline

Family and domain databases

InterProiView protein in InterPro
IPR012510, Actin-binding_Xin_repeat
IPR030072, XIRP1/XIRP2
PANTHERiPTHR22591, PTHR22591, 1 hit
PfamiView protein in Pfam
PF08043, Xin, 15 hits
PROSITEiView protein in PROSITE
PS51389, XIN, 26 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiXIRP1_DANRE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q5PZ43
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: January 4, 2005
Last modified: June 2, 2021
This is version 83 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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