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Protein

Armadillo repeat-containing protein 1

Gene

armc1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Armadillo repeat-containing protein 1UniRule annotation
Gene namesi
Name:armc1Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 24

Organism-specific databases

ZFINiZDB-GENE-041212-33 armc1

Expressioni

Gene expression databases

BgeeiENSDARG00000013861 Expressed in 18 organ(s), highest expression level in mature ovarian follicle

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000009420

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410II16 Eukaryota
ENOG4111EGZ LUCA
GeneTreeiENSGT00390000014100
HOGENOMiHOG000007530
HOVERGENiHBG055281
KOiK17306
OMAiAASCRRK
OrthoDBiEOG091G0G9T
TreeFamiTF316742

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR036163 HMA_dom_sf
IPR016617 UCP013899_metal-bd
PIRSFiPIRSF013899 UCP013899, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit
SSF55008 SSF55008, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q5PR58-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSGEPDALAV VNQLRDLAAD PLNRRVIVED QGCFSGLILF LDHPNPQVVY
60 70 80 90 100
SALLAVRYLA ECRANREKMK GELGMMLSLQ NVMQKGTSPG ETKLLASEIY
110 120 130 140 150
EILQNSSSAE AEQAEAGASC RRKAQFFLGA TNKRAKTVVL QIDGLDDSSR
160 170 180 190 200
RSLCEEALLK IKGVISFTFQ MAVKRCVVRI RSDLKAEALG TAIASTKVMK
210 220 230 240 250
AQQVVKGEDG AELVIPFQED SDVVVEQNLN LPDYLPEDES PSQEQHKAVT
260 270
RLGSVQDGVS WLNTAANFLS RSFYW
Length:275
Mass (Da):30,241
Last modified:January 4, 2005 - v1
Checksum:i7D3E81EDCCA13C42
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F6P4I7F6P4I7_DANRE
Armadillo repeat-containing protein...
armc1
243Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU019631 Genomic DNA No translation available.
BC086818 mRNA Translation: AAH86818.1
RefSeqiNP_001008609.1, NM_001008609.1
UniGeneiDr.26140

Genome annotation databases

EnsembliENSDART00000012399; ENSDARP00000009420; ENSDARG00000013861
GeneIDi494066
KEGGidre:494066

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU019631 Genomic DNA No translation available.
BC086818 mRNA Translation: AAH86818.1
RefSeqiNP_001008609.1, NM_001008609.1
UniGeneiDr.26140

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000009420

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000012399; ENSDARP00000009420; ENSDARG00000013861
GeneIDi494066
KEGGidre:494066

Organism-specific databases

CTDi55156
ZFINiZDB-GENE-041212-33 armc1

Phylogenomic databases

eggNOGiENOG410II16 Eukaryota
ENOG4111EGZ LUCA
GeneTreeiENSGT00390000014100
HOGENOMiHOG000007530
HOVERGENiHBG055281
KOiK17306
OMAiAASCRRK
OrthoDBiEOG091G0G9T
TreeFamiTF316742

Gene expression databases

BgeeiENSDARG00000013861 Expressed in 18 organ(s), highest expression level in mature ovarian follicle

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR036163 HMA_dom_sf
IPR016617 UCP013899_metal-bd
PIRSFiPIRSF013899 UCP013899, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit
SSF55008 SSF55008, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ5PR58_DANRE
AccessioniPrimary (citable) accession number: Q5PR58
Entry historyiIntegrated into UniProtKB/TrEMBL: January 4, 2005
Last sequence update: January 4, 2005
Last modified: November 7, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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