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Protein
Submitted name:

Ribosomal RNA processing 1 homolog (S. cerevisiae)

Gene

Rrp1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • rRNA processing Source: GO_Central

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal RNA processing 1 homolog (S. cerevisiae)Imported
Submitted name:
Ribosomal RNA-processing 1Imported
Gene namesi
Name:Rrp1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 20

Organism-specific databases

RGDi1307286 Rrp1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000001203 Expressed in 10 organ(s), highest expression level in testis

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000001597

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3911 Eukaryota
ENOG4111GJ6 LUCA
GeneTreeiENSGT00390000011821
HOGENOMiHOG000070179
HOVERGENiHBG000394
KOiK14849
OMAiQTMIREW
OrthoDBiEOG091G0AX5
TreeFamiTF315294

Family and domain databases

InterProiView protein in InterPro
IPR010301 Nop52
PANTHERiPTHR13026 PTHR13026, 1 hit
PfamiView protein in Pfam
PF05997 Nop52, 1 hit

Sequencei

Sequence statusi: Complete.

Q5M9F3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVPGVPLPPE IQLAQRLAGN EQVTRDRALR KLQKYIVARS QRATGGFTPE
60 70 80 90 100
ELLKVWKGLF YCMWMQDKPL QQEDLGRTIA QLVHAFQTTE SQHLFLRAFW
110 120 130 140 150
QTMIREWVGI DRLRLDKFYM LMRMVLSESL KAVKTGGWEE RQIEQLLQLL
160 170 180 190 200
TTEILSPDSQ APNGVKSHFL EIFLEELTKV GAAELTADQN LQFIKPFCQI
210 220 230 240 250
AARTKDSLVL HKITQSIFEA IVEQAPLAIE DLMNELDAQS GEGEGSDEDD
260 270 280 290 300
GDDDSDEASE DEQDLQDTAP KNQPAGSVSR ADLEVDEEAW DDEEDTGPVL
310 320 330 340 350
QFDYEAVANK LFKLASRQST PSQNRKRLYK VIQKLRDLAG GIFPEDDVPE
360 370 380 390 400
KAYKKLLEGR RKQKKKKKRL PTLQPQNKEG GSETEASSAD PSRGRKRKRS
410 420 430 440
RKTDEKAGQR GPPGKRRKPG ARAKGPRVQQ PKRKKKGSSQ SAK
Length:443
Mass (Da):50,162
Last modified:February 1, 2005 - v1
Checksum:i714A92B843C70D1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07044574 Genomic DNA No translation available.
BC087152 mRNA Translation: AAH87152.1
RefSeqiNP_001012073.1, NM_001012073.1
UniGeneiRn.104084

Genome annotation databases

EnsembliENSRNOT00000001597; ENSRNOP00000001597; ENSRNOG00000001203
GeneIDi309674
KEGGirno:309674
UCSCiRGD:1307286 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07044574 Genomic DNA No translation available.
BC087152 mRNA Translation: AAH87152.1
RefSeqiNP_001012073.1, NM_001012073.1
UniGeneiRn.104084

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000001597

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000001597; ENSRNOP00000001597; ENSRNOG00000001203
GeneIDi309674
KEGGirno:309674
UCSCiRGD:1307286 rat

Organism-specific databases

CTDi8568
RGDi1307286 Rrp1

Phylogenomic databases

eggNOGiKOG3911 Eukaryota
ENOG4111GJ6 LUCA
GeneTreeiENSGT00390000011821
HOGENOMiHOG000070179
HOVERGENiHBG000394
KOiK14849
OMAiQTMIREW
OrthoDBiEOG091G0AX5
TreeFamiTF315294

Gene expression databases

BgeeiENSRNOG00000001203 Expressed in 10 organ(s), highest expression level in testis

Family and domain databases

InterProiView protein in InterPro
IPR010301 Nop52
PANTHERiPTHR13026 PTHR13026, 1 hit
PfamiView protein in Pfam
PF05997 Nop52, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ5M9F3_RAT
AccessioniPrimary (citable) accession number: Q5M9F3
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: November 7, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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