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Protein

Cancer/testis antigen 47A

Gene

CT47A1

more
Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Cancer/testis antigen 47A
Alternative name(s):
Cancer/testis antigen 47
Short name:
CT47
Gene namesi
Name:CT47A1
Synonyms:CT47.1
AND
Name:CT47A2
Synonyms:CT47.2
AND
Name:CT47A3
Synonyms:CT47.3
AND
Name:CT47A4
Synonyms:CT47.4
AND
Name:CT47A5
Synonyms:CT47.5
AND
Name:CT47A6
Synonyms:CT47.6
AND
Name:CT47A7
Synonyms:CT47.7
AND
Name:CT47A8
Synonyms:CT47.8
AND
Name:CT47A9
Synonyms:CT47.9
AND
Name:CT47A10
Synonyms:CT47.10
AND
Name:CT47A11
Synonyms:CT47.11
AND
Name:CT47A12
Synonyms:CT47.12
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome X

Organism-specific databases

EuPathDBiHostDB:ENSG00000224089.3
HostDB:ENSG00000226023.5
HostDB:ENSG00000226600.3
HostDB:ENSG00000226685.4
HostDB:ENSG00000226929.3
HostDB:ENSG00000228517.2
HostDB:ENSG00000230347.4
HostDB:ENSG00000230594.3
HostDB:ENSG00000236126.3
HostDB:ENSG00000236371.4
HostDB:ENSG00000237957.5
HostDB:ENSG00000242362.2
HGNCiHGNC:33282 CT47A1
HGNC:33291 CT47A10
HGNC:27397 CT47A11
HGNC:33292 CT47A12
HGNC:33283 CT47A2
HGNC:33284 CT47A3
HGNC:33285 CT47A4
HGNC:33286 CT47A5
HGNC:33287 CT47A6
HGNC:33288 CT47A7
HGNC:33289 CT47A8
HGNC:33290 CT47A9
MIMi300592 gene
300780 gene
300781 gene
300782 gene
300783 gene
300784 gene
300785 gene
300786 gene
300787 gene
300788 gene
300789 gene
neXtProtiNX_Q5JQC4

Pathology & Biotechi

Organism-specific databases

DisGeNETi255313
OpenTargetsiENSG00000236371
PharmGKBiPA164718206

Polymorphism and mutation databases

BioMutaiCT47A1
DMDMi74741726

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002844501 – 288Cancer/testis antigen 47AAdd BLAST288

Proteomic databases

MaxQBiQ5JQC4
PaxDbiQ5JQC4
PeptideAtlasiQ5JQC4
PRIDEiQ5JQC4
ProteomicsDBi63038

PTM databases

iPTMnetiQ5JQC4
PhosphoSitePlusiQ5JQC4

Expressioni

Tissue specificityi

Strongly expressed in testis, low expression in placenta, and very low expression in brain.1 Publication

Gene expression databases

BgeeiENSG00000224089
GenevisibleiQ5JQC4 HS

Organism-specific databases

HPAiHPA042483

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000415974

Structurei

3D structure databases

ProteinModelPortaliQ5JQC4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili259 – 287Sequence analysisAdd BLAST29

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi92 – 98Poly-Glu7

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410JFPN Eukaryota
ENOG4111B8F LUCA
GeneTreeiENSGT00390000002253
HOGENOMiHOG000112037
HOVERGENiHBG094803
InParanoidiQ5JQC4
OMAiRASEYEH
OrthoDBiEOG091G12R2
PhylomeDBiQ5JQC4
TreeFamiTF342556

Family and domain databases

InterProiView protein in InterPro
IPR028930 CT47
PANTHERiPTHR32157 PTHR32157, 1 hit
PfamiView protein in Pfam
PF15623 CT47, 1 hit

Sequencei

Sequence statusi: Complete.

Q5JQC4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSATGDRHPT QGDQEAPVSQ EGAQAEAAGA GNQEGGDSGP DSSDVVPAAE
60 70 80 90 100
VVGVAGPVEG LGEEEGEQAA GLAAVPRGGS AEEDSDIGPA TEEEEEEEGN
110 120 130 140 150
EAANFDLAVV ARRYPASGIH FVLLDMVHSL LHRLSHNDHI LIENRQLSRL
160 170 180 190 200
MVGPHAAARN LWGNLPPLLL PQRLGAGAAA RAGEGLGLIQ EAASVPEPAV
210 220 230 240 250
PADLAEMARE PAEEAAEEKL SEEATEEPDA EEPATEEPTA QEATAPEEVT
260 270 280
KSQPEKWDEE AQDAAGEEEK EQEKEKDAEN KVKNSKGT
Length:288
Mass (Da):30,100
Last modified:February 15, 2005 - v1
Checksum:iAED9537B9C8EBF60
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti161L → P in AAH29540 (PubMed:15489334).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL670379 Genomic DNA No translation available.
AC008162 Genomic DNA No translation available.
BC029540 mRNA Translation: AAH29540.1
CCDSiCCDS35381.1
CCDS35382.1
CCDS35383.1
CCDS35384.1
CCDS35385.1
CCDS35386.1
CCDS35387.1
CCDS35388.1
CCDS35389.1
CCDS35390.1
CCDS35391.1
CCDS56607.1
RefSeqiNP_001073606.1, NM_001080137.1
NP_001073607.1, NM_001080138.1
NP_001073608.1, NM_001080139.1
NP_001073609.1, NM_001080140.1
NP_001073610.1, NM_001080141.1
NP_001073611.1, NM_001080142.1
NP_001073612.1, NM_001080143.1
NP_001073613.1, NM_001080144.1
NP_001073614.1, NM_001080145.1
NP_001073615.1, NM_001080146.1
NP_001229851.1, NM_001242922.1
NP_775842.2, NM_173571.2
UniGeneiHs.522775
Hs.712504
Hs.715076
Hs.723061
Hs.729566

Genome annotation databases

EnsembliENST00000415858; ENSP00000389513; ENSG00000230594
ENST00000417256; ENSP00000408204; ENSG00000226600
ENST00000419194; ENSP00000399711; ENSG00000226023
ENST00000419982; ENSP00000391318; ENSG00000226685
ENST00000430448; ENSP00000411909; ENSG00000224089
ENST00000433030; ENSP00000393315; ENSG00000236371
ENST00000434883; ENSP00000392283; ENSG00000228517
ENST00000439466; ENSP00000390070; ENSG00000237957
ENST00000441330; ENSP00000398559; ENSG00000236126
ENST00000457020; ENSP00000410400; ENSG00000226929
ENST00000457977; ENSP00000400046; ENSG00000230347
ENST00000458218; ENSP00000414253; ENSG00000242362
GeneIDi100507170
255313
653282
728036
728042
728049
728062
728072
728075
728082
728090
728096
KEGGihsa:100507170
hsa:255313
hsa:653282
hsa:728036
hsa:728042
hsa:728049
hsa:728062
hsa:728072
hsa:728075
hsa:728082
hsa:728090
hsa:728096
UCSCiuc004eta.4 human

Similar proteinsi

Entry informationi

Entry nameiCT47A_HUMAN
AccessioniPrimary (citable) accession number: Q5JQC4
Secondary accession number(s): Q8N747
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: February 15, 2005
Last modified: July 18, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome X
    Human chromosome X: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

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