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Protein
Submitted name:

PMS1 nirs variant 6

Gene

PMS1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
PMS1 nirs variant 6Imported
Submitted name:
PMS1 protein homolog 1Imported
Gene namesi
Name:PMS1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

EuPathDBiHostDB:ENSG00000064933.16
HGNCiHGNC:9121 PMS1

Subcellular locationi

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000064933

PTM / Processingi

Proteomic databases

MaxQBiQ5FBZ4
PeptideAtlasiQ5FBZ4
PRIDEiQ5FBZ4

Expressioni

Gene expression databases

BgeeiENSG00000064933 Expressed in 226 organ(s), highest expression level in sperm
ExpressionAtlasiQ5FBZ4 baseline and differential

Structurei

3D structure databases

SMRiQ5FBZ4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1978 Eukaryota
COG0323 LUCA
GeneTreeiENSGT00530000063289
HOGENOMiHOG000137699
HOVERGENiHBG055685

Family and domain databases

CDDicd00075 HATPase_c, 1 hit
Gene3Di3.30.565.10, 1 hit
InterProiView protein in InterPro
IPR014762 DNA_mismatch_repair_CS
IPR003594 HATPase_C
IPR036890 HATPase_C_sf
IPR038973 MutL/Mlh/Pms
IPR031263 PMS1_hom
PANTHERiPTHR10073 PTHR10073, 2 hits
PTHR10073:SF43 PTHR10073:SF43, 2 hits
SUPFAMiSSF55874 SSF55874, 1 hit
PROSITEiView protein in PROSITE
PS00058 DNA_MISMATCH_REPAIR_1, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 13 potential isoforms that are computationally mapped.Show allAlign All

Q5FBZ4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKQLPAATVR LLSSSQIITS VVSVVKELIE NSLDAGATSV DVKLENYGFD
60 70 80 90 100
KIEVRDNGEG IKAVDAPVMA MKYYTSKINS HEDLENLTTY GFRGEALGSI
110 120 130 140 150
CCIAEVLITT RTAADNFSTQ YVLDGSGHIL SQKPSHLGQG TTVTALRLFK
160 170 180 190 200
NLPVRKQFYS TAKKCKDEIK KIQDLLMSFG ILKPDLRIVF VHNKGEAVRL
210 220 230 240
SRQLPMYLSK EDIQDIIYRM KHQFGNEIKE CVHGRPFFHH LTYLPETT
Length:248
Mass (Da):27,842
Last modified:March 15, 2005 - v1
Checksum:iCCF427B3C37D51D8
GO

Computationally mapped potential isoform sequencesi

There are 13 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P54277PMS1_HUMAN
PMS1 protein homolog 1
PMS1 PMSL1
932Annotation score:
Q3BDU3Q3BDU3_HUMAN
PMS1 protein homolog 1
PMS1
659Annotation score:
B7ZAA0B7ZAA0_HUMAN
PMS1 protein homolog 1
PMS1
756Annotation score:
Q5FBZ9Q5FBZ9_HUMAN
PMS1 nirs variant 1
PMS1
667Annotation score:
E9PC65E9PC65_HUMAN
PMS1 protein homolog 1
PMS1
711Annotation score:
E9PH88E9PH88_HUMAN
PMS1 protein homolog 1
PMS1
266Annotation score:
E9PC40E9PC40_HUMAN
PMS1 protein homolog 1
PMS1
181Annotation score:
Q5XG96Q5XG96_HUMAN
PMS1 protein
PMS1
165Annotation score:
C9JF76C9JF76_HUMAN
PMS1 protein homolog 1
PMS1
194Annotation score:
F8W8L1F8W8L1_HUMAN
PMS1 protein homolog 1
PMS1
108Annotation score:
There are more potential isoformsShow all

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC008122 Genomic DNA No translation available.
AC013468 Genomic DNA No translation available.
AB102874 mRNA Translation: BAD89403.1
UniGeneiHs.111749

Genome annotation databases

EnsembliENST00000618056; ENSP00000480632; ENSG00000064933
UCSCiuc061qpr.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC008122 Genomic DNA No translation available.
AC013468 Genomic DNA No translation available.
AB102874 mRNA Translation: BAD89403.1
UniGeneiHs.111749

3D structure databases

SMRiQ5FBZ4
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiQ5FBZ4
PeptideAtlasiQ5FBZ4
PRIDEiQ5FBZ4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000618056; ENSP00000480632; ENSG00000064933
UCSCiuc061qpr.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000064933.16
HGNCiHGNC:9121 PMS1
OpenTargetsiENSG00000064933
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1978 Eukaryota
COG0323 LUCA
GeneTreeiENSGT00530000063289
HOGENOMiHOG000137699
HOVERGENiHBG055685

Miscellaneous databases

ChiTaRSiPMS1 human

Gene expression databases

BgeeiENSG00000064933 Expressed in 226 organ(s), highest expression level in sperm
ExpressionAtlasiQ5FBZ4 baseline and differential

Family and domain databases

CDDicd00075 HATPase_c, 1 hit
Gene3Di3.30.565.10, 1 hit
InterProiView protein in InterPro
IPR014762 DNA_mismatch_repair_CS
IPR003594 HATPase_C
IPR036890 HATPase_C_sf
IPR038973 MutL/Mlh/Pms
IPR031263 PMS1_hom
PANTHERiPTHR10073 PTHR10073, 2 hits
PTHR10073:SF43 PTHR10073:SF43, 2 hits
SUPFAMiSSF55874 SSF55874, 1 hit
PROSITEiView protein in PROSITE
PS00058 DNA_MISMATCH_REPAIR_1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ5FBZ4_HUMAN
AccessioniPrimary (citable) accession number: Q5FBZ4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 15, 2005
Last sequence update: March 15, 2005
Last modified: September 12, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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